DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and scnn1b

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001072437.1 Gene:scnn1b / 779891 XenbaseID:XB-GENE-949109 Length:646 Species:Xenopus tropicalis


Alignment Length:674 Identity:137/674 - (20%)
Similarity:229/674 - (33%) Gaps:213/674 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RIRYGSPLSACKGLLLEYAKSTTIHGIRYIFEVHRPIYEKLYWLFFTCISVYFAVSLIWD----- 111
            ||:.| |....|.||:.:..:|..||.:.|  :.....:::.|...|.:   ||..:.|.     
 Frog    19 RIQKG-PGYTYKELLVWFCDNTNTHGPKRI--IKEGPKKRVMWFILTLV---FAGLVFWQWGVLI 77

  Fly   112 -TYLKWQES-PVILGFDETLVPVHKIPFPTITIC-----------PEIK---------MER---- 150
             |||.:..| .:.:||       ..:.||.:|:|           |.:|         ::|    
 Frog    78 LTYLSYGVSVSLSIGF-------KTMEFPAVTVCNANPYKYSRVKPLLKDLDALVATALDRIQFS 135

  Fly   151 -----NVFDYTNVSRQ------LWEE-------------------------YKQNGNISDLDDED 179
                 |.|..::.::.      ||..                         |.:|.:..:..::.
 Frog   136 SQDQANTFTQSSTNQNVTLDPTLWNHIPLVVIDETDPSNPIVNNIFDNNAIYSKNNSFRNSSEDQ 200

  Fly   180 LA---RMAVAMHICDSE----VVQRFTP--------LLSQLNP--PNVDVTQTLI------DLSI 221
            .:   |..|||.:|.:.    |.:.||.        .|.||:.  .||.:...:.      ||.:
 Frog   201 TSYSQRYKVAMKLCTNNNTQCVYRNFTSGIQALQEWYLLQLSSIFSNVPLADRIAMGFKAEDLIL 265

  Fly   222 SKNETGPFCKWNGRFYFCDKIFDFVATDEGICYQFN-GLRPKDIYRDEKFISYVDPDVVDFNKYF 285
            :....|..|.:..    ..:|:|   .|.|.||.|| |...:|.      ::..:|. .||....
 Frog   266 TCLFGGQPCSYRN----FTRIYD---ADYGNCYIFNWGQEGEDP------MASANPG-ADFGLKL 316

  Fly   286 DVDLPPWNNITGNWSLDTGFVDQGQN-AYPQRTVFSSVKNGFFAFLQGLQHNFDYDCRSFKQGYK 349
            .:|                 ::||:. .|.|.|..:                            :
 Frog   317 VLD-----------------IEQGEYLPYVQTTAAA----------------------------R 336

  Fly   350 VFLNSPESVPLTTGNYILVPHGDEVLVSVLPAYVVSTDNLHEITPEKRQCLFDDE----RSL--R 408
            :.|:...|.|......|....|.|..::||      .|.|..:......|..:..    ::|  .
 Frog   337 LILHQQRSFPFVKDLGIYAMPGTETSIAVL------VDQLEHMEAPYSSCTVNGSDIPVQNLYAE 395

  Fly   409 FFRSYSQSNCQTECLANYTVSKCGCAKFWMPKPLGTPVCGLKD-----INCYTSAQDELYTLMQN 468
            |..|||..:|...|.....|..||||.:..|.|.|:..|. .|     :.||...:|        
 Frog   396 FNSSYSIQSCLRSCYQEQMVQTCGCADYQYPLPNGSEYCS-NDKYPDWVPCYYGLRD-------- 451

  Fly   469 QTMAKSIDESVDITCNCMPACTSLEYNFEISRAKYDVAKT------IRAFREEYEHTDAIGS--- 524
                 |:.:.......|...|...:|...||.|.:..|..      :.::.::..|...:..   
 Frog   452 -----SVADRESCISLCQQPCNDTQYKMVISMADWPSAGAQDWIFHVLSYEKDSSHNITVNRNGI 511

  Fly   525 -RLSVYFKEHQFTAIKRTILFGVSTLISNCGGICGLFMGISCLSFLEL-------IYFFCMRICG 581
             ||::||:|..:.:|..:....|..|:||.||..|.:||.|.|..:|.       ::...:::..
 Frog   512 VRLNIYFQEFNYRSITESEATNVVWLLSNLGGQFGFWMGGSVLCIIEFGEIIIDCVWITILKLLA 576

  Fly   582 SCRDRRKHKIQQQNSVDLPEEKSE 605
            ..:|||:.: |:....|.|...||
 Frog   577 WIKDRRQRR-QRAQYADPPPTVSE 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 122/624 (20%)
scnn1bNP_001072437.1 ENaC 27..632 CDD:273304 133/665 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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