DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and Scnn1a

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_035454.2 Gene:Scnn1a / 20276 MGIID:101782 Length:700 Species:Mus musculus


Alignment Length:612 Identity:125/612 - (20%)
Similarity:202/612 - (33%) Gaps:211/612 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YAKSTTIHG-IRYIFEVHRPIYEKLYWLFFTCI--SVYFAVSLIWDTYLKWQESPVILGFDETLV 130
            :..:||||| ||.:...|..:....:.:.:.|.  .:|:..:|:::.|..:   ||.|..:   :
Mouse    88 FCNNTTIHGAIRLVCSKHNRMKTAFWAVLWLCTFGMMYWQFALLFEEYFSY---PVSLNIN---L 146

  Fly   131 PVHKIPFPTITIC-------PEIKMERNVFDYTNVSRQ-LWEEYKQNGNISDLDDEDLARMAVAM 187
            ...|:.||.:|:|       .|||.:....|  .::.| |::.||.|.:.:        |.|...
Mouse   147 NSDKLVFPAVTVCTLNPYRYTEIKEDLEELD--RITEQTLFDLYKYNSSYT--------RQAGGR 201

  Fly   188 HICDSEVVQRFT---------PLLSQLNPPNVDVTQTLIDLSISKNETGPFC---KWNGRFYFCD 240
                    :|.|         ||.....||..:..::....|.|..:..|..   .|...|..|:
Mouse   202 --------RRSTRDLRGALPHPLQRLRTPPPPNPARSARSASSSVRDNNPQVDRKDWKIGFQLCN 258

  Fly   241 KIFDFVATDEGICYQFNGLRPKDIYRDEKFISYVD-----PD---------------VVDFNK-- 283
            :       ::..|:........|..|:.....|::     ||               ...||:  
Mouse   259 Q-------NKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFTCRFNQAP 316

  Fly   284 -----YFDVDLPPWNN-ITGNWSLDTGFVDQGQNAYPQRTVFSSVKNGFFAFLQGLQHNFDYDCR 342
                 |.....|.:.| .|.|         ...|:....:....|.||....|:..|::|     
Mouse   317 CNQANYSQFHHPMYGNCYTFN---------NKNNSNLWMSSMPGVNNGLSLTLRTEQNDF----- 367

  Fly   343 SFKQGYKVFLNSPESVPL---TTGNYILVPHGD-------------------------EVLVSVL 379
                           :||   .||..::| ||.                         |.|.|:.
Mouse   368 ---------------IPLLSTVTGARVMV-HGQDEPAFMDDGGFNVRPGVETSISMRKEALDSLG 416

  Fly   380 PAYVVSTDNLHEITPEKRQCLFDDERSLRFFRSYSQSNCQTECLANYTVSKCGCAKFWMPKPLGT 444
            ..|...|:|..:: |.|.  |:..:        |:|..|...|.....:.|||||..:.|||.|.
Mouse   417 GNYGDCTENGSDV-PVKN--LYPSK--------YTQQVCIHSCFQENMIKKCGCAYIFYPKPKGV 470

  Fly   445 PVCG-LKDIN---CYTSAQDELYTLMQNQTMAKSIDESVDITCNCMPACT--------------- 490
            ..|. ||..:   ||...|           .|.|:| |:.....|...|:               
Mouse   471 EFCDYLKQSSWGYCYYKLQ-----------AAFSLD-SLGCFSKCRKPCSVTNYKLSAGYSRWPS 523

  Fly   491 -----------SLEYNFEISRAKYDVAKTIRAFREEYEHTDAIGSRLSVYFKEHQFTAIKRTILF 544
                       ||:.|:.|:..:..|||                  |:::|||..:.....:...
Mouse   524 VKSQDWIFEMLSLQNNYTINNKRNGVAK------------------LNIFFKELNYKTNSESPSV 570

  Fly   545 GVSTLISNCGGICGLFMGISCLSFLEL 571
            .:.:|:||.|....|:.|.|.||.:|:
Mouse   571 TMVSLLSNLGSQWSLWFGSSVLSVVEM 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 125/612 (20%)
Scnn1aNP_035454.2 ENaC 80..677 CDD:273304 125/612 (20%)
deg-1 88..600 CDD:273309 125/612 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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