DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and acd-5

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_491196.3 Gene:acd-5 / 189051 WormBaseID:WBGene00020903 Length:714 Species:Caenorhabditis elegans


Alignment Length:648 Identity:129/648 - (19%)
Similarity:238/648 - (36%) Gaps:177/648 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GPELLALPGFDTRASIASAALSDVPSDVIIKSRIRYGSPLSACKGLLLEYAKSTTIHGIRYIFEV 84
            |..|..|..|..|   ||..:.|||  |....:|:....:|:.......::.:||:||.:.|:  
 Worm    70 GSFLSELKPFSKR---ASQLIVDVP--VAHLRKIKNTEGVSSITRESEHFSNTTTLHGPKRIY-- 127

  Fly    85 HRPIYEKLYWLFFTCISVYFAVSLIWDTYLKWQESPVI--LGFDETLVPVHKIPFPTITICPEIK 147
            :...:..::|:|....|:...::.:......:...|.:  :.|   |:....:.||.:|:|....
 Worm   128 NGKGWSCVFWVFIWISSMIMLLTQVTSLISMYISKPTVSQVSF---LLSEGGMQFPRVTVCSFNP 189

  Fly   148 MERNVFDYTNVSRQLWEEYKQNGNISDLDDE--DLARM-------------AVAMHICDSEVVQR 197
            ::|...:..|.::             ||.|:  |...|             |.::|..|: |.:.
 Worm   190 IKRTTVEALNSTK-------------DLSDDLLDYLMMFNSDAMTLYGRADAASLHSGDN-VFKH 240

  Fly   198 FTPLLSQLNPPNVDVTQTLIDLSISKNETGPFCKWNGRFYFCDKIFDFVATDEGICYQFN----- 257
            :..     :.||.......:|...|..:....|.:.||.:.|.|....:.:|.|.|:..|     
 Worm   241 YVS-----SHPNFTADNFFMDAGFSCGDMFKMCSFGGRRFDCCKYATPIFSDLGKCFTLNLQGSD 300

  Fly   258 --------------GLR-PKDIYRDEKFISYVDPDVVDFNKYFDVDLPPWNNITGNWSLDTGFVD 307
                          ||: ..|.:.:|:|.|..|                  .:|           
 Worm   301 KSWMKMQTEPGIAAGLQIILDSHLEEQFDSETD------------------GVT----------- 336

  Fly   308 QGQNAYPQRTVFSSVKNGFFAFLQGLQHNFDYDCRSFKQGYKVFLNSPESVPLTTGNYILVPHGD 372
                     .||||                     :|:.|::.:::|.|.:|......|.| ..|
 Worm   337 ---------PVFSS---------------------AFENGFRFYIHSSEEIPFLASEGIAV-SPD 370

  Fly   373 EVLVSVLPA--YVVSTDNLHEITPEKRQCLFDDERSLRFFRSYSQSNCQTECLANYTVSKCGCA- 434
            .|:.|.|.:  |::.:.|..      ..|.....|...:...|:.:.|.|.|.|.|..:.|||: 
 Worm   371 SVVYSALSSSKYILLSSNAW------GNCSDSWPRGYDYSFPYTSAMCSTMCKAQYFQNLCGCSP 429

  Fly   435 -------KFWMPKPLGTPVCGLKDINCYTSAQDELYTLMQNQTMAKSIDESVDI---TC-NCMPA 488
                   :|....|..|.:|                   .:..|.|.:::|.:|   || .|...
 Worm   430 SIYNHLNRFNDCTPYETFIC-------------------MDTKMKKVVNQSFNIEMPTCEECKVE 475

  Fly   489 CTSLEYNFEISRAKYDVAK------TIRAFREEY--EHTDAIGSRLSVYFKEHQFTAIKRTILFG 545
            |.|..|:...|..| .:::      |.:..:|.:  .|.......::|:|::..:|...:.....
 Worm   476 CKSQVYHSFNSYGK-GLSRGALMWLTKQGKQETWTIPHMKLNFQVVNVFFRDMSYTEYIQKRGMS 539

  Fly   546 VSTLISNCGGICGLFMGISCLSFLELIYFFCMRI--CGSCRDRRKHKIQQQNSVDLPEEKSEN 606
            ::.|:|:.||..|:|||:|..:.:|| :.|..:|  .|..|.||.:...::.:.::.|::.|:
 Worm   540 LTELLSDIGGNMGMFMGMSVFTIIEL-FLFLSKIGWIGFSRKRRDYMYSKKKNEEMHEKELED 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 108/563 (19%)
acd-5NP_491196.3 ASC 114..547 CDD:279230 99/542 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

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