DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and acd-4

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_505230.1 Gene:acd-4 / 185036 WormBaseID:WBGene00017879 Length:613 Species:Caenorhabditis elegans


Alignment Length:552 Identity:115/552 - (20%)
Similarity:191/552 - (34%) Gaps:147/552 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 YAKSTTIHGIRYIFEVHRPIYEKLYWLF----FTCISVYFAVSLIWDTYLKWQESPVILGFDETL 129
            ::..||::|.|.||...|.  .:::|:.    .....||..|.||...|.|           .||
 Worm    39 FSTITTVNGPRRIFYGKRS--AQIFWILVVISILAFLVYQIVILIQYFYSK-----------PTL 90

  Fly   130 VPVHKIP------FPTITICPEIKMERNVFDYTNVSRQLWEEYK--------------QNGNISD 174
            ..::.|.      ||::|:|....::.:.....|.|..|.||..              .|.||.:
 Worm    91 SQINFITNEGAVYFPSVTVCNLNPVKTSFIKKLNSSGDLSEELLNYLLATKTNSMYMFNNANIFE 155

  Fly   175 LDDEDLARMAVAMHICDSEVVQRFTPLLSQLNPPNVDVTQTLIDLSISKNETGPFCKWNGRFYFC 239
            |....|                  ..|:...|.|:.::...|.......:|....|.:.|:.:.|
 Worm   156 LKRAHL------------------NALVYLANHPDFEIVNFLNSAQFDCDELFETCFYGGKQFNC 202

  Fly   240 DKIFDFVATDEGICYQFNGLRPKDIYRDEKFISYVDPDVVDFNKYFDVDLPPWNNITGNWSLDTG 304
            .|......|..|.|::.| ||                                 |.|..|     
 Worm   203 CKYMTQSITSLGRCWELN-LR---------------------------------NETDAW----- 228

  Fly   305 FVDQGQNAYPQRTVFSSVKNGFFAFLQGLQH-NFDYDCRSFKQ-GYKVFLNSPESVPLTTGNYIL 367
            ...:|::....:|....:.|.    .|..|. ||.|.  ||:: |::.|::.|...|      .|
 Worm   229 LTKKGRSGTSPKTGLQIIANA----RQSEQFINFHYS--SFQENGFRYFIHPPHVSP------DL 281

  Fly   368 VPHGDEVLVSVLPAYVVST---DNLHEITPEKR--QCLFDDERSLRFFRSYSQSNCQTECLANYT 427
            ...|    ::|.|:.||::   ..||::...:.  .|.............||.|.||..|::||.
 Worm   282 AAEG----ITVSPSRVVNSAIKTVLHDLLNHENWGNCTSSWPEHYNTNLPYSSSACQALCVSNYF 342

  Fly   428 VSKCGCAKFWMPKPLGTPVCGLKDINCYTSAQDELYTLMQNQTMAKS---IDESVDITCNCMPAC 489
            ...|||:.:.......|.||         ...:|:..:|:..|.:.|   :.........|..||
 Worm   343 KKLCGCSPYSYNIDNNTQVC---------LPYEEVICMMEKMTKSDSNGTVSLDFPFCAECHLAC 398

  Fly   490 TSLEYN--------FEISRAKYDVAKTIRA---FREEYEHTDAIGSRLSVYFKEHQFTAIKRTIL 543
            ....|:        |..:..|:...:|.|:   .|:..    ||   ::::|.|..:|:..:...
 Worm   399 QKTSYSSYTSYGDGFNYNSMKWLTRETNRSASYIRQNI----AI---INIHFMELFYTSYSQVKA 456

  Fly   544 FGVSTLISNCGGICGLFMGISCLSFLELIYFF 575
            ..:....:...|:.||:.|:|.:|..|||.:|
 Worm   457 TTILNTFNKIFGLNGLWFGMSVVSLTELILYF 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 114/549 (21%)
acd-4NP_505230.1 ASC 39..487 CDD:279230 114/549 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.