DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and delm-1

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_501590.2 Gene:delm-1 / 184882 WormBaseID:WBGene00009073 Length:626 Species:Caenorhabditis elegans


Alignment Length:605 Identity:123/605 - (20%)
Similarity:218/605 - (36%) Gaps:150/605 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DTRASIASAALS-DVPSDVIIKSRIRYGS---------PLSACK------GLL------LEYAKS 72
            |.||..:..:|| ..||.:..|...||..         |::..|      |.:      ..:.::
 Worm    12 DFRAGSSKESLSPSTPSPMYPKCNFRYNDSRTQMIIEVPMAQLKKFQKAEGTISVKRETQHFCET 76

  Fly    73 TTIHGIRYIFEVHRPIYEKLYWLFFTCISVYFAVSLIWDTYLKWQESPVI--LGFDETLVPVHKI 135
            ||:||.:.||:..| |:.||:||.....|:...:...|.....:...|::  :.|   |:|...:
 Worm    77 TTMHGPKRIFKGKR-IFTKLFWLIMVLGSLGLLIYQCWILSASYLSKPIVSQVSF---LIPEDGM 137

  Fly   136 PFPTITICPEIKMERNVFDYTNVSRQLWEEYKQNGNISDLDDEDL--------ARMAVAMHICDS 192
            .||::|:|          ::|.:.:...|...:.|::|    .|:        ..:.:.:...|.
 Worm   138 EFPSVTVC----------NFTPIRKSYIEAMNRTGDVS----PDMINYLMNWFTEIPILLGNTDQ 188

  Fly   193 EVVQRFTPLLSQLNP--PNVDVTQTLIDLSISKNETGPFCKWNGRFYFCDKIFDFVATDEGICYQ 255
            :.:.:....|.:...  ||..|.|..:|.|...::....|.:.|..:.|             |  
 Worm   189 QSLNKGNEELREYQSIHPNFTVDQFFMDASFDCSDLMKLCSFQGESFDC-------------C-- 238

  Fly   256 FNGLRPKDIYRDEKFISYVDPDVVDFNKYFDVDL--PPWNNITG-------NWSLDTGFVDQGQN 311
                            |...|.:....|.|.:||  .|.|..|.       :.:||....:|   
 Worm   239 ----------------SLASPTLTPVGKCFTLDLSKSPMNKQTEPGIRAGLSLTLDANLDEQ--- 284

  Fly   312 AYPQRTVFSSVKNGFFAFLQGLQHNFDYDCRSFKQGYKVFLNSPESVP-LTTGNYILVPHGDEVL 375
                   |.| ..|..|.|.          .||..|::.|::..:::| |.:..|.:.|  :.|.
 Worm   285 -------FDS-STGIDALLP----------NSFVNGFRYFVHPKDTIPNLASDEYTVSP--NSVA 329

  Fly   376 VSVLP--AYVVSTDNLHEITPEKRQCLFDDERSLRFFRSYSQSNCQTECLANYTVSKCGCA---- 434
            .|.:.  .||:...|      :...|..|....::...||:..||.:.|.|.|.:::|||.    
 Worm   330 YSAISKFRYVLLPPN------DWGNCTEDYPYGIQSNLSYTSGNCLSLCKAKYFMNQCGCTPALY 388

  Fly   435 ----KFWMPKPLGTPVCGLKDINCYTSAQDELYTLMQNQTMAKSIDESVDITCNCMPACTSLEYN 495
                .|....|..|       .||..::...|     |:...|...:....| .|...|.|..|.
 Worm   389 NIGNNFQECTPFET-------YNCVNNSLSLL-----NEETGKMEFQPPSCT-RCGQQCDSQVYR 440

  Fly   496 FEISRAKYDVAKTIRAFREE-----YEHTDAIGSRLSVYFKEHQFTAIKRTILFGVSTLISNCGG 555
            .:.|......|.....|..:     .::..:....:.:::::..:|...:.....::.|:|..||
 Worm   441 ADNSNGNQFSAGAFNYFNSKNSSWSVDYMKSNFQMIRIFYRDMSYTEYNQVQDASITDLLSAIGG 505

  Fly   556 ICGLFMGISCLSFLELIYFF 575
            ..|:|:|.|.::.:||..||
 Worm   506 NMGMFLGGSVITIVELFLFF 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 108/541 (20%)
delm-1NP_501590.2 ASC 73..524 CDD:279230 108/541 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14160
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

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