DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and mec-10

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_509438.1 Gene:mec-10 / 181101 WormBaseID:WBGene00003174 Length:724 Species:Caenorhabditis elegans


Alignment Length:706 Identity:126/706 - (17%)
Similarity:228/706 - (32%) Gaps:232/706 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PSDVIIKSRIRYGSPLSACKGLLLEYAKSTTIHGIRYIFEVHRPIYEKLYWLFFTCI-SVYF--- 104
            |:.:..:.|||:.         |.::...|:.|||..:.:....:| :..|:|...| ::.|   
 Worm    84 PTRLSYRERIRWH---------LQQFCYKTSSHGIPMLGQAPNSLY-RAAWVFLLLICAIQFINQ 138

  Fly   105 AVSLIWDTYLKWQE-SPVILGFDETLVPVHKIPFPTITIC-------PEIKMERNVFDYTNVSRQ 161
            ||::| ..|.|..: :.:.|.||..       |||.||:|       ..|:...::.....|.:.
 Worm   139 AVAVI-QKYQKMDKITDIQLKFDTA-------PFPAITLCNLNPYKDSVIRSHDSISKILGVFKS 195

  Fly   162 LWE----------------EYKQNG----------------------NISDLDDEDLARMAVAMH 188
            :.:                ||..||                      :..:.|:||      ..:
 Worm   196 VMKKAGDSSSEALEEEEETEYDMNGITIQAKRKKRGAGEKGTFEPANSACECDEED------GSN 254

  Fly   189 ICDSEVVQRFTPLLSQLNPPNVDVTQTLIDLSISKNETGP----------FCKWNGRFYFCDKIF 243
            .|:....::          |:.|....:.......|:..|          .|:.....|.|.|  
 Worm   255 ECEERSTEK----------PSGDNDMCICAFDRQTNDAWPCHRKEQWTNTTCQTCDEHYLCSK-- 307

  Fly   244 DFVATDEGICYQFNGLRPKDIYRDEKFISYVDPD----VVDFNKYFDVDLPPWNNIT-------- 296
               ...:|.  :.:.|:.:....:.|.:..:..:    |::..:||. |...::.|:        
 Worm   308 ---KAKKGT--KRSELKKEPCICESKGLFCIKHEHAAMVLNLWEYFG-DSEDFSEISTEEREALG 366

  Fly   297 -GNWSLDTGFVDQGQN---------AYPQRTVFSSVKNGFFAFLQGLQHN--------------- 336
             ||.:.:...|.:.:.         :..||.:.|..|:       .|.|.               
 Worm   367 FGNMTDEVAIVTKAKENIIFAMSALSEEQRILMSQAKH-------NLIHKCSFNGKPCDIDQDFE 424

  Fly   337 ------------FDYDCRSFKQGYK----------VFLNSPESVP--------LTTGNYILVPHG 371
                        |::|...||...:          :|:|:.:.:|        ||..:....|..
 Worm   425 LVADPTFGNCFVFNHDREIFKSSVRAGPQYGLRVMLFVNASDYLPTSEAVGIRLTIHDKDDFPFP 489

  Fly   372 DEVLVSVLPAYVVS----TDNLHEITPEKRQCLFDDERSLRFFR--SYSQSNCQTECLANYTVSK 430
            |....|....|:.|    ...:..:......|:.|...|...::  :||...|...|.....:.:
 Worm   490 DTFGYSAPTGYISSFGMRMKKMSRLPAPYGDCVEDGATSNYIYKGYAYSTEGCYRTCFQELIIDR 554

  Fly   431 CGCAKFWMPKPLGTPVCGLKDINCYTSAQDELYTLMQNQTMAKSIDESVDI----TCNCMPACTS 491
            |||:....|...|...|             :::.....:.:.|...:..:|    .|.|...|..
 Worm   555 CGCSDPRFPSIGGVQPC-------------QVFNKNHRECLEKHTHQIGEIHGSFKCRCQQPCNQ 606

  Fly   492 LEYNFEISRAKY----------DVAKTIRAFREEYEHTDAIGSRLSVYFKEHQFTAIKRTILFGV 546
            ..|....|.|.:          ...|......|||:...|:   |.|:::...|..:..:..:|:
 Worm   607 TIYTTSYSEAIWPSQALNISLGQCEKEAEECNEEYKENAAM---LEVFYEALNFEVLSESEAYGI 668

  Fly   547 STLISNCGGICGLFMGIS--------CLSFLELIYFFCMRICGSCRDRRKHKIQQQ 594
            ..::::.||..||:.|:|        ||:| ||||   |.|.        |.|.||
 Worm   669 VKMMADFGGHLGLWSGVSVMTCCEFVCLAF-ELIY---MAIA--------HHINQQ 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 114/659 (17%)
mec-10NP_509438.1 ASC 88..723 CDD:295594 125/702 (18%)
deg-1 99..696 CDD:273309 108/652 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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