DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and asic1

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_004912018.1 Gene:asic1 / 100489966 XenbaseID:XB-GENE-977699 Length:525 Species:Xenopus tropicalis


Alignment Length:598 Identity:128/598 - (21%)
Similarity:208/598 - (34%) Gaps:154/598 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IKSRIRYGS--PLSACKGLLLEYAKSTTIHGIRYIFEVHRPIYEKLYWLFFTCISVYFAVSLIWD 111
            :|.....||  |||     :..:|..:|:||:.:||...|....:|.|:.....|:...:.:..:
 Frog     3 VKEAEELGSPQPLS-----VQAFASGSTLHGLAHIFTYERFSCRRLIWVLCFLGSLSLLLYVCTE 62

  Fly   112 TYLKWQESPVILGFDETLVPVHKIPFPTITICPEIKMERNVFDYTNVSR----QLWEEYKQNGNI 172
            ..:.:.|.|.:...||...|  ::.||.:|.|     ..|.|.::.|::    ...|......|.
 Frog    63 RIIYYFEYPHVTKLDEISTP--RMIFPAVTFC-----NLNEFRFSRVTKNDLYHAGELLSLLNNR 120

  Fly   173 SDLDDEDLARMAVAMHICDSEVVQRFTPLLSQLNPPNV---------DVTQTLIDLSISKNETGP 228
            .:|.|..||...|...:.|....:.|.|     .|.|:         |:.:.|:.          
 Frog   121 YELPDSQLADEKVMEILQDKANFRNFKP-----KPFNMREFYDRTGHDIREMLLS---------- 170

  Fly   229 FCKWNGRFYFCDKIFDFVA--TDEGICYQFNGLRPKDIYRDEKFISYVDPDVVDFNKYFDVDLPP 291
             ||:.|.....|   |||.  |..|.||.||                                  
 Frog   171 -CKYRGEECSVD---DFVPVFTRYGKCYTFN---------------------------------- 197

  Fly   292 WNNITGNWSLDTGFVDQGQNA-YPQRTVFSSVKNGFFAFLQGLQHNF-----DYDCRSFKQGYKV 350
                            .|:|. .|..|......||....|...|..:     :.|..||:.|.||
 Frog   198 ----------------SGRNGRSPLVTTKGGTGNGLELMLDIQQDEYLPVWGETDETSFEAGIKV 246

  Fly   351 FLNSPESVPLTTGNYILVPHGDEVLVSVLPAYVV----STDNLHEITPEKRQC---LFDDERSLR 408
            .::|.:..|..          |::...|.|.:..    ....|..:.|....|   ..|.|    
 Frog   247 QIHSQDEPPFI----------DQLGFGVAPGFQTFVSCQEQRLTYLPPPWGDCKSSAMDSE---- 297

  Fly   409 FFRSYSQSNCQTECLANYTVSKCGCAKFWMPKPLG--TPVCGLKDINCYTSAQDELYTLMQNQTM 471
            ||.:||.|.|:.:|...|.|..|.|....||....  ||               |||....:..:
 Frog   298 FFDTYSISACRIDCETRYLVENCNCRMVHMPGDAAYCTP---------------ELYKECADPAL 347

  Fly   472 AKSIDESVDITCNCMPACTSLEYNFEISRAKYDVAKTIRAFREEYEHTDAIGSR----LSVYFKE 532
            ...:::..|. |.|...|....|..|:|..|.....:.|...::|..::...:.    |.::|:.
 Frog   348 DFLVEKDNDF-CVCETPCNMTRYGKELSMVKIPSKASARYLAKKYNKSEQYIAENILVLDIFFEA 411

  Fly   533 HQFTAIKRTILFGVSTLISNCGGICGLFMGISCLSFLELIYF----FCMRICGSC---RDRRKHK 590
            ..:..|::...:.|:.|:.:.||..|||:|.|.|:.|||..:    ...::||..   :|.:::.
 Frog   412 LNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVLRYKLCGGAKCGKDSKRNN 476

  Fly   591 IQQQNSVDLPEEK 603
            ..:..::.|.:.|
 Frog   477 NDKGVTLSLDDVK 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 117/538 (22%)
asic1XP_004912018.1 ASC 18..507 CDD:413546 122/578 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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