DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and asic4

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_031749131.1 Gene:asic4 / 100486325 XenbaseID:XB-GENE-940165 Length:535 Species:Xenopus tropicalis


Alignment Length:593 Identity:127/593 - (21%)
Similarity:206/593 - (34%) Gaps:179/593 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GSPLSACKGLLLEYAKSTTIHGIRYIFEVHRPIYEKLYWLFFTCISVYFAVSLIWDTYLKWQESP 120
            |..:.|....|..:|.::|:||:|:||:..|...::..|......|:.|.:..:....|.:.|.|
 Frog    31 GDEVPAAGRDLAAFASTSTLHGLRHIFQTGRLGIKQSLWALAFLASLLFFLYQVAKCALYYLEHP 95

  Fly   121 VILGFDETLVPVHKIPFPTITICPEIKMERNVFDYTNVSRQLWEEYKQNGNISDLDDEDLARMAV 185
            .:...||.:  :.::.||.||||             |::|     ::.    |.|.|.|:..:|.
 Frog    96 HVTAVDEEV--MGEMIFPAITIC-------------NINR-----FRH----SALTDPDIYHLAN 136

  Fly   186 AMHI--------CDSEVVQRFTPLLSQLNPPNVDVTQTLIDLSISKNETGPFCKWNGRFYFCDKI 242
            ...:        .||:::.....:|..:|...    ..|.::..|.|.:|..|....        
 Frog   137 LTGLPPKDREGHRDSDLMYDDPDMLDIVNRTG----HQLAEMLKSCNFSGDSCSAQN-------- 189

  Fly   243 FDFVATDEGICYQFNG--LRPK---------------DIYRDEKFISYVDPDVVDFNKYFDVDLP 290
            |..|.|..|.||.||.  ..||               ||.::|.                   ||
 Frog   190 FSVVFTRYGKCYTFNADKKHPKVSRQGGMGNGLEIMLDIQQEEY-------------------LP 235

  Fly   291 PWNNITGNWSLDTG----FVDQGQNAYPQRTVFSSVKNGFFAFLQGLQHNFDY------DCRSFK 345
            .|.. |...|.:.|    ...|.:..|..:..| .|..||..|:...:....|      :|||  
 Frog   236 IWRE-TNETSFEAGIRVQIHSQDEPPYIHQMGF-GVSPGFQTFVSCQEQRMTYLPQPWGNCRS-- 296

  Fly   346 QGYKVFLNSPESVPLTTGNYILVPHGDEVLVSVLPAYVVSTDNLHEITPEKRQCLFDDERSLRFF 410
                       |:|           |:|.|..                                :
 Frog   297 -----------SIP-----------GEEFLSG--------------------------------Y 307

  Fly   411 RSYSQSNCQTECLANYTVSKCGCAKFWMP--KPLGTPVCGLKDINCYTSAQDELYTLMQNQTMAK 473
            .:||.|.|:.:|.....:.||.|....||  :.:.:||       .|..| |.:...|...|..|
 Frog   308 STYSISACRLQCEKEAVIRKCACRMVHMPGNETICSPV-------MYMCA-DHILDNMVEDTSEK 364

  Fly   474 SIDESVDITCNCMPACTSLEYNFEISRAKYDVAKTIRAFREEYEHTDAIGSR----LSVYFKEHQ 534
                     |:|...|....|:.|||..:.....:.|....:|...:.....    |.::|:...
 Frog   365 ---------CSCPTPCNLTRYSKEISMVRIPNKGSARYLARKYNKNETYIRENFLVLDIFFEALN 420

  Fly   535 FTAIKRTILFGVSTLISNCGGICGLFMGISCLSFLELIYFFCMRICGSCRDRRKHKIQQQNSVDL 599
            :..|::...:.:.:|:.:.||..|||:|.|.|:.||::.:....|    ||:.|....::.|   
 Frog   421 YETIEQKKAYDLPSLLGDIGGQMGLFIGASFLTILEILDYMYEVI----RDKVKRVAGRKQS--- 478

  Fly   600 PEEK-SEN 606
            |.:| |||
 Frog   479 PAKKPSEN 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 114/545 (21%)
asic4XP_031749131.1 ASC 39..514 CDD:413546 125/585 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

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