DRSC/TRiP Functional Genomics Resources

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Protein Alignment spel1 and MSH5

DIOPT Version :10

Sequence 1:NP_523565.2 Gene:spel1 / 34842 FlyBaseID:FBgn0015546 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_751897.1 Gene:MSH5 / 4439 HGNCID:7328 Length:835 Species:Homo sapiens


Alignment Length:826 Identity:214/826 - (25%)
Similarity:359/826 - (43%) Gaps:174/826 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 KLDGGGQRRVG-VASVEQNDCKFQLLEFLDD-DFFTELEATVVLLGPKECLLPSIEGEYSAVKTL 215
            |.|....|.:| :||.|..:.|...:.||.. ||..|:.        |:.||   .|.||.:...
Human   105 KQDENMTRFLGKLASQEHREPKRPEIIFLPSVDFGLEIS--------KQRLL---SGNYSFIPDA 158

  Fly   216 LDRNGVMITMPKKSGDNDLL--QDLNRLLRFAKGQQEDATGLKELQLQLASNALKTAIKYLDLVN 278
            :.....::.:......:.||  :.|..||:|        .|.:.:.::|....:...|       
Human   159 MTATEKILFLSSIIPFDCLLTVRALGGLLKF--------LGRRRIGVELEDYNVSVPI------- 208

  Fly   279 DAGNLGHYEIKQLDLNRFVHLDSAAVAALNIMPKPGTHPSMPSYR-------WQSVLGVLDHCRT 336
                ||   .|:..|...|::|....:.|.|. |..:|||:  |:       ..|:.|:|:.|..
Human   209 ----LG---FKKFMLTHLVNIDQDTYSVLQIF-KSESHPSV--YKVASGLKEGLSLFGILNRCHC 263

  Fly   337 PQGHRLMGQWVKQPLRSRNILNDRHNIVQCLL--ESPDTMETLS--LDYLKRIPDILMLTKKLMR 397
            ..|.:|:..|..:|......|:.|.:::|..|  ::.|..:.|.  |.::|.:|.||...|....
Human   264 KWGEKLLRLWFTRPTHDLGELSSRLDVIQFFLLPQNLDMAQMLHRLLGHIKNVPLILKRMKLSHT 328

  Fly   398 RKANLQDLFR-IYQVI-LR-----TPKILKVLHELDNSTIESVICAPFKSFLKDLTGLKQMVEQV 455
            :.::.|.|:: :|..: ||     .|:.:::..::            .:.|..||..:..::.:|
Human   329 KVSDWQVLYKTVYSALGLRDACRSLPQSIQLFRDI------------AQEFSDDLHHIASLIGKV 381

  Fly   456 VDFE-AIERGEYLVKASFD-------SRLMELQQMMTELYSKMEELQFKCSQELNLDGK------ 506
            |||| ::....:.|..:.|       .|||.|...:||:..|  ||:       |||.:      
Human   382 VDFEGSLAENRFTVLPNIDPEIDEKKRRLMGLPSFLTEVARK--ELE-------NLDSRIPSCSV 437

  Fly   507 ----------NQVKLESVAKLGHHFRITVKDDSVLRKNK-NYRI-----VDVIKGGVRFTSDKLE 555
                      :..:|.|:.: ...|.|...|...|.:.| :||.     :|.:.|.:.       
Human   438 IYIPLIGFLLSIPRLPSMVE-ASDFEINGLDFMFLSEEKLHYRSARTKELDALLGDLH------- 494

  Fly   556 GYADEFASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNELAQLDCLVSFAIAARSAPTPYVRP 620
                    |..|  :|:..::.::....:..||.||.:.:..::||.|::.|.|||.  ..|.||
Human   495 --------CEIR--DQETLLMYQLQCQVLARAAVLTRVLDLASRLDVLLALASAARD--YGYSRP 547

  Fly   621 KMLEE--GARELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFIITGPNMGGKSTYIRSVGTA 683
            :...:  |.|   :::.|||.:||... .|:.||.:...::..:.:|||||..|||.|::.||..
Human   548 RYSPQVLGVR---IQNGRHPLMELCAR-TFVPNSTECGGDKGRVKVITGPNSSGKSIYLKQVGLI 608

  Fly   684 VLMAHIGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEM-IETSGIIRTATDKSLVIIDE 747
            ..||.:|:|||...|.|..||:|..|:.:.::|..||||||::: .:.:..:..||.:|||:|||
Human   609 TFMALVGSFVPAEEAEIGAVDAIFTRIHSCESISLGLSTFMIDLNQQVAKAVNNATAQSLVLIDE 673

  Fly   748 LGRGTSTYEGCGIAWSIAEH-LAKETKCFTLF-ATHFHEITK--------LAETLSTVKNCHMAA 802
            .|:||:|.:|..:..::..| ||:...|..:| ||:|..:.:        |.:.| |::.|.   
Human   674 FGKGTNTVDGLALLAAVLRHWLARGPTCPHIFVATNFLSLVQLQLLPQGPLVQYL-TMETCE--- 734

  Fly   803 VADADDFTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYNEFEDEHVDKQKKEDKALLEK 867
              |.:|....|||..||.:.|.....|..|..|:.:|...:||.:....   .|..|..|.||:|
Human   735 --DGNDLVFFYQVCEGVAKASHASHTAAQAGLPDKLVARGKEVSDLIRS---GKPIKPVKDLLKK 794

  Fly   868 IQVAIQQLSTAGNNVDINVEDLTQLVTQFTK-DIE--QLDSDYFKS 910
            .|                :|:...||.:|.| |:|  .||.:.|.|
Human   795 NQ----------------MENCQTLVDKFMKLDLEDPNLDLNVFMS 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spel1NP_523565.2 MutS_I 24..132 CDD:426350
MutS 174..890 CDD:440019 196/779 (25%)
MSH5NP_751897.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
mutS1 <245..774 CDD:273427 153/579 (26%)
ABC_MSH5_euk 557..764 CDD:213248 74/216 (34%)
Blue background indicates that the domain is not in the aligned region.

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