DRSC/TRiP Functional Genomics Resources

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Protein Alignment spel1 and MSH4

DIOPT Version :10

Sequence 1:NP_523565.2 Gene:spel1 / 34842 FlyBaseID:FBgn0015546 Length:917 Species:Drosophila melanogaster
Sequence 2:NP_002431.2 Gene:MSH4 / 4438 HGNCID:7327 Length:936 Species:Homo sapiens


Alignment Length:840 Identity:214/840 - (25%)
Similarity:367/840 - (43%) Gaps:152/840 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 SIISLLVKLDGGGQRRVGVASVEQNDCKFQLLEFLDDDFFTELEATVVLLGPKECLLPSIE---G 207
            |:|..:|:..|..:..:|:||::..:.:..|.:|.|:..:.::...:.:|.|.|.::.:..   |
Human   155 SVIVAVVEGRGLARGEIGMASIDLKNPQIILSQFADNTTYAKVITKLKILSPLEIIMSNTACAVG 219

  Fly   208 EYSAVKTLLDRN--GVMITMPKKSGDNDLLQDLNRLLRFAKGQQ--------EDATGLKELQLQ- 261
            ..:.:.||:..|  .|..|..::...|:           .||.:        |.:|.|.|:|.: 
Human   220 NSTKLFTLITENFKNVNFTTIQRKYFNE-----------TKGLEYIEQLCIAEFSTVLMEVQSKY 273

  Fly   262 --LASNALKTAIKYLDLVNDAGNLGHYEIKQLDL-----NRFVHLDSAAVAALNIMPKPGTHPSM 319
              ||  |:...:||::.:.::    .|..|.|.:     .:...:||::...|.::      .:.
Human   274 YCLA--AVAALLKYVEFIQNS----VYAPKSLKICFQGSEQTAMIDSSSAQNLELL------INN 326

  Fly   320 PSYRWQSVL-GVLDHCRTPQGHRLMGQWVKQPLRSRNILNDRHNIVQCLLESP------------ 371
            ..||....| |||::.:||.|.|.:...:.:||.....:|.|.:.||.||:..            
Human   327 QDYRNNHTLFGVLNYTKTPGGSRRLRSNILEPLVDIETINMRLDCVQELLQDEELFFGLQSVISR 391

  Fly   372 --DTMETLSLDYLKRIP--DILMLTKK------LMRRKANLQDLFRIYQVILRTPKILKVLHELD 426
              ||.:.||:  |.:||  |.:...:.      .::....|.|..:|......||.:......|:
Human   392 FLDTEQLLSV--LVQIPKQDTVNAAESKITNLIYLKHTLELVDPLKIAMKNCNTPLLRAYYGSLE 454

  Fly   427 NSTIESVICAPFKSFLKD----LTGLKQMVEQVVDFEAIERGEYLVKASFDSRLMELQQMMTELY 487
            :... .:|....|:.:.|    :.|...|..|..         |.|:::.:..|...::..||: 
Human   455 DKRF-GIILEKIKTVINDDARYMKGCLNMRTQKC---------YAVRSNINEFLDIARRTYTEI- 508

  Fly   488 SKMEELQFKCSQELNLDGKNQVKLESVAKLGHHFRITVKDDSV-------------LRKNKN--- 536
              ::::....||   |..|..:.|.:.......|.|.:..|.:             :.|.||   
Human   509 --VDDIAGMISQ---LGEKYSLPLRTSFSSARGFFIQMTTDCIALPSDQLPSEFIKISKVKNSYS 568

  Fly   537 YRIVDVIKGGVRFTSDKLEGYADEF-ASCRTRYEEQQLSIVEEIIHVAVGYAAPLTLLNNELAQL 600
            :...|:||...|......|.|...: ..|:.      ||.:.|.||.       |..|::.::.|
Human   569 FTSADLIKMNERCQESLREIYHMTYMIVCKL------LSEIYEHIHC-------LYKLSDTVSML 620

  Fly   601 DCLVSFAIAARSAPTPYVRPKMLEEGARELVLEDVRHPCLELQEHVNFIANSVDFKKEECNMFII 665
            |.|:|||.|.  ..:.||||:..:    .|.::...||.||.......|||:. :..|..|..||
Human   621 DMLLSFAHAC--TLSDYVRPEFTD----TLAIKQGWHPILEKISAEKPIANNT-YVTEGSNFLII 678

  Fly   666 TGPNMGGKSTYIRSVGTAVLMAHIGAFVPCSLATISMVDSILGRVGASDNIIKGLSTFMVEMIET 730
            |||||.|||||::.:....:||.||::||...::..:...|..|:...|:|....||||.||.|.
Human   679 TGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAKQIFTRISTDDDIETNSSTFMKEMKEI 743

  Fly   731 SGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETLSTV 795
            :.|:..|.||||::||||||||:|.||.||.:::.|:|. ..|.||||||||.|:..:......|
Human   744 AYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLL-SLKAFTLFATHFLELCHIDALYPNV 807

  Fly   796 KNCHMA------AVADADDFTLLYQVRSGVM-EKSFGIQVARLANFPEHVVQNAQEVYNEFEDEH 853
            :|.|..      ...:.:.....|::..|:. ||::|::.|.:::.|..:|.:|:|:..:...:.
Human   808 ENMHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKNYGLKAAEVSSLPPSIVLDAKEITTQITRQI 872

  Fly   854 VDKQKKEDKALLEKIQVAIQQLSTAGNNVDINVEDLTQLVTQFTKDIEQLDSDYFKSVLA 913
            :..|:...:  :|: |.|:..|:             |:||.  |....|||.|..:..|:
Human   873 LQNQRSTPE--MER-QRAVYHLA-------------TRLVQ--TARNSQLDPDSLRIYLS 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spel1NP_523565.2 MutS_I 24..132 CDD:426350
MutS 174..890 CDD:440019 198/787 (25%)
MSH4NP_002431.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 103..133
MutS 157..864 CDD:440019 198/768 (26%)
Blue background indicates that the domain is not in the aligned region.

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