DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and Rab6a

DIOPT Version :10

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_038948673.1 Gene:Rab6a / 84379 RGDID:619737 Length:211 Species:Rattus norvegicus


Alignment Length:197 Identity:68/197 - (34%)
Similarity:112/197 - (56%) Gaps:11/197 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQERFRAV 100
            ||.:.:|:..|||:.|:.:|....|......|||::|.::.:.::|:.::||:||||||||||::
  Rat    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly   101 TRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYEEAKE 165
            ..||.|.:..|::|||||..:::...:.|:.|.|.......:|.|:|||:||...|:|:.||.:.
  Rat    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 143

  Fly   166 FADENGLMFLEASAMTGQNVEE-----AFLETA-----RKIYQNIQEGRLDLNASESGVQHRPSQ 220
            .|.|..:||:|.||..|.||::     :.|.|.     ..:..|..:....:|.||| ::..|..
  Rat   144 KAKELNVMFIETSAKAGYNVKQLPTIASHLRTQGCSQYLTVALNCSDSLRKINCSES-LRKEPIP 207

  Fly   221 PS 222
            |:
  Rat   208 PA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 61/172 (35%)
Rab6aXP_038948673.1 Rab6 14..173 CDD:206654 59/158 (37%)

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