DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and ArRABA1h

DIOPT Version :9

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_180943.4 Gene:ArRABA1h / 817957 AraportID:AT2G33870 Length:218 Species:Arabidopsis thaliana


Alignment Length:176 Identity:90/176 - (51%)
Similarity:123/176 - (69%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQE 95
            :|:|:||.::.||.|||||.||.:||...|..:...||||||.||.|:||||.:|.|||||||||
plant     9 DYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQE 73

  Fly    96 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTY 160
            |:||:|.:|||||.|||:|||:||..|:.::..||.:.|:.|:.:|||.|:|||:||...|.::.
plant    74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAIST 138

  Fly   161 EEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 206
            ||.|:||:.....|:|.||:...|||.||.|...:||:.:.:..||
plant   139 EEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALD 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 87/164 (53%)
ArRABA1hNP_180943.4 Rab11_like 11..175 CDD:206660 85/163 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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