DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and rab26

DIOPT Version :9

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_012826040.1 Gene:rab26 / 780350 XenbaseID:XB-GENE-489728 Length:249 Species:Xenopus tropicalis


Alignment Length:204 Identity:77/204 - (37%)
Similarity:124/204 - (60%) Gaps:23/204 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PNMTAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMA-NCPHTIGVEFGTRIIEVDDKKIKL 86
            |:::.:...|:..||.:::||.||||:|||.:|.:..|:| :...|:|::|..:::.||..|:||
 Frog    44 PSLSNSGEFYDIAFKVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLNVDGVKVKL 108

  Fly    87 QIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSD 151
            ||||||||||||:||.:|||.|...|::||:|.:|:::::.:|||:.........||.|:|||.|
 Frog   109 QIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKSSFDNIQAWLTEIHEYAQKDVVIMLLGNKVD 173

  Fly   152 LESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQH 216
            ....|.|..|:.:..|.|.|:.|:|.||.:|.||:.||:..|:::                  :|
 Frog   174 STHERVVKIEDGERLAKEYGVPFMETSAKSGLNVDLAFIAIAKEL------------------KH 220

  Fly   217 R----PSQP 221
            |    |::|
 Frog   221 RSMKLPNEP 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 71/165 (43%)
rab26XP_012826040.1 Rab26 57..247 CDD:206695 75/191 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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