DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and rab43

DIOPT Version :9

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001038812.1 Gene:rab43 / 751627 ZFINID:ZDB-GENE-060825-25 Length:208 Species:Danio rerio


Alignment Length:167 Identity:71/167 - (42%)
Similarity:113/167 - (67%) Gaps:1/167 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQE 95
            :|:.:||.:::||:||||:|::.:|....|:....:||||:|..:.:|:..|::|||||||||||
Zfish     9 SYDLVFKIVLVGDVGVGKTCVVQRFKTGIFIEKQGNTIGVDFTMKTLEIHGKRVKLQIWDTAGQE 73

  Fly    96 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTY 160
            |||.:|:||||.|.||::.||||:::|:..:..|:.|.:.....:.|..|||||.||..:|||..
Zfish    74 RFRTITQSYYRSANGAIITYDITKKATFLSVPKWMEDVKKYGGSNIVPLLIGNKCDLSESREVPL 138

  Fly   161 EEAKEFADE-NGLMFLEASAMTGQNVEEAFLETARKI 196
            |:|:..|.: :.:..:|.||....||:|||.:.|.::
Zfish   139 EDAQTMAHQLDFVSAIETSAKDSSNVDEAFNKMASEL 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 70/164 (43%)
rab43NP_001038812.1 P-loop_NTPase 11..175 CDD:304359 70/163 (43%)
RAB 14..178 CDD:197555 70/162 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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