DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and Rab39b

DIOPT Version :9

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_780331.1 Gene:Rab39b / 67790 MGIID:1915040 Length:213 Species:Mus musculus


Alignment Length:208 Identity:85/208 - (40%)
Similarity:135/208 - (64%) Gaps:3/208 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVD-DKKIKLQIWDTAGQERF 97
            |.|:.|:|||..||||||:.:|||.:|......|:||:|.:|::|:: .|:||||||||||||||
Mouse     7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQERF 71

  Fly    98 RAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIF-LIGNKSDLESTREVTYE 161
            |::||:|||.:.|.|:::|||.|.::.::..||.:|:....|..::| |:|:|.||::.|:||..
Mouse    72 RSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLDTQRQVTRH 136

  Fly   162 EAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTSL 226
            ||::.|...|:.::|.||....|||:||.:..|.||:.::.|.:.:.....||: ....|:....
Mouse   137 EAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGWEGVK-SGFVPNVVHS 200

  Fly   227 SSEATGAKDQCSC 239
            |.|...::.:|.|
Mouse   201 SEEVIKSERRCLC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 77/166 (46%)
Rab39bNP_780331.1 Rab39 7..213 CDD:133311 84/206 (41%)
Effector region. /evidence=ECO:0000250 37..45 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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