DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and Rab4b

DIOPT Version :10

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_059051.1 Gene:Rab4b / 50866 RGDID:620931 Length:213 Species:Rattus norvegicus


Alignment Length:214 Identity:123/214 - (57%)
Similarity:151/214 - (70%) Gaps:11/214 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQER 96
            |:::||:::||..|.|||||||||.|.||..:..||||||||:|::.|..|.:||||||||||||
  Rat     5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69

  Fly    97 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYE 161
            ||:|||||||||||||:|||||.|.|||.|::||||.|.|.:|:.|:.|.|||.||:..||||:.
  Rat    70 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFL 134

  Fly   162 EAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQH------RPSQ 220
            ||..||.||.|||||.||:||:|||||||:.||.|...|..|.||.....||:|:      :..|
  Rat   135 EASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSGIQYGDISLRQLRQ 199

  Fly   221 PSRTSLSSEATGAKDQCSC 239
            |.    |::|. |...|.|
  Rat   200 PR----SAQAV-APQPCGC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 108/164 (66%)
Rab4bNP_059051.1 Rab4 9..169 CDD:206696 107/159 (67%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 39..44 4/4 (100%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 65..74 7/8 (88%)

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