DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and Rab27

DIOPT Version :9

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_726743.1 Gene:Rab27 / 31103 FlyBaseID:FBgn0025382 Length:236 Species:Drosophila melanogaster


Alignment Length:172 Identity:61/172 - (35%)
Similarity:103/172 - (59%) Gaps:9/172 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDK----KIKLQIWDTAGQERF 97
            :::::||.||||:|||:|:|:.:|......|:|::|..:.:..:.:    :|.||||||||||||
  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83

  Fly    98 RAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRN---LTNPSTVIFLIGNKSDLESTREVT 159
            |::|.::||.|.|.|:::|:|...::...::||:..|.   ..:|..|  |.|||.||...|.|:
  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVV--LCGNKCDLLQLRVVS 146

  Fly   160 YEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQ 201
            .::.........|.::|.||.||.||:||......::.:.|:
  Fly   147 RDQVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERIE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 60/168 (36%)
Rab27NP_726743.1 P-loop_NTPase 19..187 CDD:304359 60/169 (36%)
RAB 20..186 CDD:197555 60/167 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454439
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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