DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and Rab21

DIOPT Version :10

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001004238.1 Gene:Rab21 / 299799 RGDID:1303150 Length:223 Species:Rattus norvegicus


Alignment Length:221 Identity:71/221 - (32%)
Similarity:115/221 - (52%) Gaps:17/221 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPH--TIGVEFGTRIIEVDDKKIKLQIW 89
            ||.....|.||.:::|:..|||:.|:.::.|.||  |..|  |:...|.|:.:.:..|::.|.||
  Rat     9 AAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKF--NDKHITTLQASFLTKKLNIGGKRVNLAIW 71

  Fly    90 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLES 154
            ||||||||.|:...|||.:.||::|||:|...::..:.:|:.:.|.:......:.::|||.|||.
  Rat    72 DTAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEK 136

  Fly   155 TREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQ-------EGRLDLNASES 212
            .|.|:.:||:.:|:..|......||...:.:||.||:..:::.:..|       .|.....|:..
  Rat   137 ERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQAGAARR 201

  Fly   213 GVQHRPSQPSRTSLSSEATGAKDQCS 238
            |||....:|...|      |:...||
  Rat   202 GVQIIDDEPQAQS------GSGGCCS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 58/166 (35%)
Rab21NP_001004238.1 Rab21 18..179 CDD:133323 57/162 (35%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9UL25 41..54 5/14 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9UL25 74..92 10/17 (59%)

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