DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and rab-6.1

DIOPT Version :10

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_498993.1 Gene:rab-6.1 / 176275 WormBaseID:WBGene00004269 Length:205 Species:Caenorhabditis elegans


Alignment Length:209 Identity:70/209 - (33%)
Similarity:119/209 - (56%) Gaps:20/209 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 FKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQERFRAV 100
            ||.:.:|:..|||:.::.:|....|......|||::|.::.:.::|:.|:||:||||||||||::
 Worm    12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSL 76

  Fly   101 TRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYEEAKE 165
            ..||.|.::.|::|||||..::::..:.|:.|.||......:|.|:|||:||...|:|:.|:.::
 Worm    77 IPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEK 141

  Fly   166 FADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTSL---- 226
            .|.:..:||:|.||..|.||::.|.:.|..:...:||             ..|.||:...:    
 Worm   142 KARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQE-------------ETPEQPNIVIMNPPK 193

  Fly   227 -SSEATGAKDQCSC 239
             :.|:.|.  ||.|
 Worm   194 DAEESQGR--QCPC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 60/162 (37%)
rab-6.1NP_498993.1 Rab6 12..172 CDD:206654 60/159 (38%)

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