DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and rab-11.1

DIOPT Version :10

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_490675.1 Gene:rab-11.1 / 171601 WormBaseID:WBGene00004274 Length:211 Species:Caenorhabditis elegans


Alignment Length:207 Identity:95/207 - (45%)
Similarity:128/207 - (61%) Gaps:7/207 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQER 96
            |:|:||.::|||.|||||.||.:||..:|......||||||.||.|.|:.|.:|.||||||||||
 Worm     8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72

  Fly    97 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYE 161
            :||:|.:|||||.|||:||||.:..||.::..||.:.|:..:.:.||.|:||||||...|.|..:
 Worm    73 YRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTD 137

  Fly   162 EAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTSL 226
            |||.:|:.|.|.|:|.||:...|||.||.....:||:::....:..:....|      ..|.|.:
 Worm   138 EAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDRQGYG------GGSGTII 196

  Fly   227 SSEATG-AKDQC 237
            .|.|:. .|.||
 Worm   197 PSPASDPPKKQC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 86/164 (52%)
rab-11.1NP_490675.1 Rab11_like 9..173 CDD:206660 84/163 (52%)

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