DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab14 and rab39a

DIOPT Version :9

Sequence 1:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_002934692.1 Gene:rab39a / 100494491 XenbaseID:XB-GENE-1011717 Length:206 Species:Xenopus tropicalis


Alignment Length:221 Identity:80/221 - (36%)
Similarity:126/221 - (57%) Gaps:32/221 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVD-DKKIKLQIWDTAGQE 95
            :::.|:.:::||.||||:.|||::|:.:|......|:||:|..|..|.: ..|::||.|||||||
 Frog     5 WDFQFRVLLLGDSGVGKTSLLHRYTDGQFTDTTTETVGVDFCCREEEPEPGVKVRLQFWDTAGQE 69

  Fly    96 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIF-LIGNKSDLESTREVT 159
            |:|||||||||.|||.|:::|:|.|.::::::.|..:....|....::| |:|.|:||:..|.||
 Frog    70 RYRAVTRSYYRNAAGVLLLFDLTTRQSFDNVTEWHMEVTERTQAKPMVFMLLGAKNDLKEKRMVT 134

  Fly   160 YEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRT 224
            .|||:..|:.....:||.||.||.||..|.....|::          |.|:.|..|         
 Frog   135 REEAQRLAENLSAPYLETSARTGSNVSAALSLLCREL----------LRAARSQAQ--------- 180

  Fly   225 SLSSEATGA--------KDQ---CSC 239
            ..:.:::||        |:|   |:|
 Frog   181 VSTDDSSGAYCTNKEMQKNQEAKCTC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab14NP_788056.1 Rab14 34..199 CDD:133322 70/166 (42%)
rab39aXP_002934692.1 P-loop_NTPase 7..>171 CDD:393306 70/163 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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