DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)34Fd and nol10

DIOPT Version :10

Sequence 1:NP_609711.1 Gene:l(2)34Fd / 34839 FlyBaseID:FBgn0261535 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_998842.1 Gene:nol10 / 407887 XenbaseID:XB-GENE-5799993 Length:686 Species:Xenopus tropicalis


Alignment Length:724 Identity:341/724 - (47%)
Similarity:485/724 - (66%) Gaps:54/724 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVNEVNDVKIYNLSAGKSVPDWLTDRRKRSQLMKKVDSRRQIELIQDFDMPGVCTSIRMSPDQQ 65
            |.|:.||||||||||.|||:|:||:||:||:...|.||.||:|||||||:||.|.|:|::|.|.|
 Frog     1 MQVSNVNDVKIYNLSCGKSLPEWLSDRKKRALQKKDVDVRRRIELIQDFEMPTVSTNIKVSRDGQ 65

  Fly    66 YILATGTYKPRVKCFEVSNLSIKFERCFDAEVTTFEVISDDYSKMVFLQCDRYVEIHAAHGRHYR 130
            ||:|.|||||||:|::...||:|||||.||||..|:::|:||||:||||.|||||:|:.|||:||
 Frog    66 YIMAAGTYKPRVRCYDTYQLSLKFERCLDAEVVKFDILSEDYSKIVFLQSDRYVELHSQHGRYYR 130

  Fly   131 LRIPRFGRDMKYHKPSCDMFIVGVGRDIFRLNLERGQFLQPFETDGSCLNACEVNPEHHLLVAGT 195
            ||||:||||..||.||||::.||...:::|||||:|::|...:||.|.:|.|::||.|||..|||
 Frog   131 LRIPKFGRDFAYHYPSCDLYFVGASSEVYRLNLEQGRYLNSLQTDASQINVCDINPAHHLFAAGT 195

  Fly   196 KEGTVEAWDPRTKQRCSTLDVA-------MKLPGVKEFPSVTALKFRNGLHMGVGTASGHVLIYD 253
            .||.||.|||||:.|...||.|       |::.|:   |||:||||...|||.|||::|.|::||
 Frog   196 TEGKVECWDPRTRNRVGLLDCALSSVTADMEVEGL---PSVSALKFHGPLHMAVGTSTGQVVLYD 257

  Fly   254 IRAKQPLLVKNHLNRLPIKRLAFNPAQNAVYSLDEATLKLWDEQTGKQIAYVESTSSFNDFCTIP 318
            :|:.:||:.|:|...||||.:.|:.|.:.|.|.|...:|:|::..||....:|..:..||.|..|
 Frog   258 LRSNRPLIAKDHQYGLPIKSIQFHSALDLVISADSRIIKMWNKDNGKIFTSIEPEADVNDVCLYP 322

  Fly   319 DTGMFFVAQEDVKMMTYYVPAMGPAPRWCSFLDNLTEEIESEVVENVYDDYQFVTAKELAELGME 383
            ::||.|.|.|..||..||:||:||||||||||||||||:|......|||||:|||.|||.|||:.
 Frog   323 NSGMLFTANEAPKMNVYYIPALGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTRKELDELGLS 387

  Fly   384 HLVGSNLLKGYMHGYFMDARLYNKAKAVVEPFAFDRFRKDKIRQEIESERKSRLQIESKLPKVNK 448
            ||:||.||:.||||:|||.|||:|.||:|.|||::.::|:||||:||..|..|:||: |||||||
 Frog   388 HLIGSPLLRAYMHGFFMDIRLYHKVKAMVNPFAYEEYKKEKIRQKIEEARAQRVQIK-KLPKVNK 451

  Fly   449 ELALKIMDEQANPS-NSAKQRNVPSLLEDSRFKAMFENADFEVNKSAEEYRLLAPVLNRLDKSKA 512
            |||||:.:|:...| ...||:.:|::|.|.|||.||||.||:|::.:||||||.|:::::.:.:.
 Frog   452 ELALKLYEEEEELSQKKKKQKKMPNILSDDRFKVMFENPDFQVDQESEEYRLLNPLVSKISEKRK 516

  Fly   513 KELKKRVEVAHVAELHADEAQQREESDNDEDLFGFEKSDGETKDDSGDEASSDDDDRREYVKEMK 577
            |:||      .:.:|.|::.::.||            .:|:..|....|:|.|:....|.|::.:
 Frog   517 KKLK------ILEKLDAEDGEEEEE------------PEGKPSDAESSESSDDEKGWVEEVRKQR 563

  Fly   578 QAYKQVKRQREEEEELEDDEQQPDEISDTAKRPQTNGHSQQPTTNGNRFTMTPLDQHQGSSLLQQ 642
            :..:|.::||.:|...||.:        ||.:||.     .....|..|      :....:..:|
 Frog   564 KLLRQEEKQRRQERVREDQQ--------TALKPQF-----YEIKAGEEF------RSFQDAAKKQ 609

  Fly   643 RIKKASLQDRVRVMSQLEGQVTNVGRSLGNRQMTFEVNKQKKSQFHAKKREAEMKKHREERRSIV 707
            ::.:.:|:|||:|..:| |.:.....::|::|:||.:   ||.:.|.|::||| |:|:|||:.:.
 Frog   610 KLMRKTLEDRVKVEEKL-GTLNVSDTAVGSKQLTFTL---KKFEQHRKRQEAE-KQHQEERKKLR 669

  Fly   708 RPIKSLRLK 716
            |....|:.|
 Frog   670 RSAGHLKSK 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FdNP_609711.1 WD40 <56..214 CDD:475233 94/157 (60%)
WD40 <150..303 CDD:441893 72/159 (45%)
WD40 repeat 179..215 CDD:293791 20/35 (57%)
WD40 repeat 230..264 CDD:293791 17/33 (52%)
WD40 repeat 271..305 CDD:293791 11/33 (33%)
BTV_NS2 <396..584 CDD:282383 77/188 (41%)
NUC153 476..503 CDD:462385 17/26 (65%)
nol10NP_998842.1 WD 1 50..90 22/39 (56%)
WD40 repeat 55..92 CDD:293791 21/36 (58%)
WD40 repeat 98..121 CDD:293791 14/22 (64%)
WD40 repeat 126..170 CDD:293791 26/43 (60%)
WD40 145..>330 CDD:475233 84/187 (45%)
WD 2 174..213 23/38 (61%)
WD40 repeat 180..215 CDD:293791 20/34 (59%)
WD 3 228..266 21/40 (53%)
WD40 repeat 233..267 CDD:293791 18/33 (55%)
WD 4 270..308 13/37 (35%)
WD40 repeat 275..309 CDD:293791 11/33 (33%)
WD 5 310..349 19/38 (50%)
NUC153 480..506 CDD:462385 17/25 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..590 19/83 (23%)
PTZ00121 <557..>683 CDD:173412 41/146 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..686 13/31 (42%)

Return to query results.
Submit another query.