DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fd and Nol10

DIOPT Version :9

Sequence 1:NP_609711.1 Gene:l(2)34Fd / 34839 FlyBaseID:FBgn0261535 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001014098.1 Gene:Nol10 / 313981 RGDID:1359447 Length:688 Species:Rattus norvegicus


Alignment Length:724 Identity:324/724 - (44%)
Similarity:473/724 - (65%) Gaps:56/724 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVNEVNDVKIYNLSAGKSVPDWLTDRRKRSQLMKKVDSRRQIELIQDFDMPGVCTSIRMSPDQQ 65
            |.|:.:|:||||:||.|||:|:||:||:||:...|.||.||:|||||||:||.|||:|::|.|.|
  Rat     1 MQVSSLNEVKIYSLSCGKSLPEWLSDRKKRALQKKDVDVRRRIELIQDFEMPTVCTTIKVSKDGQ 65

  Fly    66 YILATGTYKPRVKCFEVSNLSIKFERCFDAEVTTFEVISDDYSKMVFLQCDRYVEIHAAHGRHYR 130
            ||||||||||||:|::...||:|||||.|:||.|||::||||||:|||..|||:|.|:..|.:|:
  Rat    66 YILATGTYKPRVRCYDTYQLSLKFERCLDSEVVTFEILSDDYSKIVFLHNDRYIEFHSQSGFYYK 130

  Fly   131 LRIPRFGRDMKYHKPSCDMFIVGVGRDIFRLNLERGQFLQPFETDGSCLNACEVNPEHHLLVAGT 195
            .|||:||||..||.||||::.||...:::|||||:|::|.|.:||.:..|.|::|..|.|...||
  Rat   131 TRIPKFGRDFSYHYPSCDLYFVGASSEVYRLNLEQGRYLNPLQTDAAENNVCDINTVHGLFATGT 195

  Fly   196 KEGTVEAWDPRTKQRCSTLDVAMKL----PGVKEFPSVTALKFRNGLHMGVGTASGHVLIYDIRA 256
            .||.||.||||.::|...||.|:..    ..:...|:::||||...|.|.|||::|.||:||:|:
  Rat   196 IEGRVECWDPRVRKRVGVLDCALNSVTADSEINSLPTISALKFNGALSMAVGTSTGQVLLYDLRS 260

  Fly   257 KQPLLVKNHLNRLPIKRLAFNPAQNAVYSLDEATLKLWDEQTGKQIAYVESTSSFNDFCTIPDTG 321
            .:|||||:|...||||.:.|..:.:.|.|.|...:|:|::.:||....:|.....||.|..|.:|
  Rat   261 DKPLLVKDHQYGLPIKSVHFQDSLDLVLSADSRIVKMWNKDSGKIFTSLEPEHDLNDVCLYPSSG 325

  Fly   322 MFFVAQEDVKMMTYYVPAMGPAPRWCSFLDNLTEEIESEVVENVYDDYQFVTAKELAELGMEHLV 386
            |...|.|..||..||:|.:||||||||||||||||:|......|||||:|||.|:|..||:.||:
  Rat   326 MILTANESPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLI 390

  Fly   387 GSNLLKGYMHGYFMDARLYNKAKAVVEPFAFDRFRKDKIRQEIESERKSRLQIESKLPKVNKELA 451
            ||..|:.||||:|||.|||:|.|.:|.|||::.:|||||||:||..|..|:|:: ||||||||||
  Rat   391 GSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLK-KLPKVNKELA 454

  Fly   452 LKIMDEQANPSNSA---KQRNVPSLLEDSRFKAMFENADFEVNKSAEEYRLLAPVLNRLDKSKAK 513
            ||:::|:.....|.   |.:::|::|.|.|||.||||.||:|::.:||:|||.|:::|:.:.:.|
  Rat   455 LKLIEEEEEKQKSTLKKKVKSLPNILTDDRFKVMFENPDFQVDEDSEEFRLLNPLVSRISEKRKK 519

  Fly   514 ELKKRVEVAHVAELHADEAQQREESDNDEDLFGFEKSDGETKDDSGDEASSDDDDRREYVKEMKQ 578
            :|:.              .:|:|:..|:|:    |:.:|:..|....|:|.|:.|..|.|::.::
  Rat   520 QLRL--------------LEQQEQLKNEEE----EEPEGKPSDAESSESSDDEKDWVEEVRKQRR 566

  Fly   579 AYKQ---VKRQREEEEELEDDEQQPDEISDTAKRPQTNGHSQQPTTNGNRFTMTPLDQHQGSSLL 640
            ..:|   ||||    |:|::|:|       |..:||.     .....|..|      :....|..
  Rat   567 LLQQEERVKRQ----EQLKEDQQ-------TVLKPQF-----YEIKAGEEF------RSFKESAT 609

  Fly   641 QQRIKKASLQDRVRVMSQLEGQVTNVGRSLGNRQMTFEVNKQKKSQFHAKKREAEMKKHREERRS 705
            :|::...:|:||:::.:: .|.::....::|::|:||.:   |:|:...|::||| |.||:||:.
  Rat   610 KQKLMNKTLEDRLKLEAK-HGTLSVSDTTVGSKQLTFTL---KRSEQQKKQQEAE-KLHRQERKK 669

  Fly   706 IVRPIKSLR 714
            :.|....||
  Rat   670 LRRSASHLR 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FdNP_609711.1 WD40 <38..338 CDD:225201 152/303 (50%)
WD40 <56..214 CDD:295369 88/157 (56%)
WD40 <149..329 CDD:295369 73/183 (40%)
WD40 repeat 179..215 CDD:293791 16/35 (46%)
WD40 repeat 230..264 CDD:293791 19/33 (58%)
WD40 repeat 271..305 CDD:293791 10/33 (30%)
BTV_NS2 <396..584 CDD:282383 77/193 (40%)
NUC153 476..503 CDD:285385 16/26 (62%)
Nol10NP_001014098.1 WD 1 50..90 25/39 (64%)
WD40 repeat 55..95 CDD:293791 26/39 (67%)
WD40 repeat 108..153 CDD:293791 25/44 (57%)
WD40 repeat 158..219 CDD:293791 29/60 (48%)
WD 2 174..213 18/38 (47%)
WD40 <182..339 CDD:421866 63/156 (40%)
WD40 repeat 228..268 CDD:293791 20/39 (51%)
WD 3 228..266 18/37 (49%)
WD 4 270..308 12/37 (32%)
WD40 repeat 275..310 CDD:293791 10/34 (29%)
WD 5 310..349 17/38 (45%)
NUC153 482..508 CDD:400467 16/25 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..561 11/36 (31%)
EnvC <558..>672 CDD:227278 37/140 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..589 10/29 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 644..688 16/39 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349438
Domainoid 1 1.000 539 1.000 Domainoid score I259
eggNOG 1 0.900 - - E1_KOG2321
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5998
Inparanoid 1 1.050 628 1.000 Inparanoid score I815
OMA 1 1.010 - - QHG53939
OrthoDB 1 1.010 - - D1099332at2759
OrthoFinder 1 1.000 - - FOG0003665
OrthoInspector 1 1.000 - - oto95540
orthoMCL 1 0.900 - - OOG6_102419
Panther 1 1.100 - - LDO PTHR14927
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2538
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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