DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fd and nol-10

DIOPT Version :9

Sequence 1:NP_609711.1 Gene:l(2)34Fd / 34839 FlyBaseID:FBgn0261535 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_501233.1 Gene:nol-10 / 177538 WormBaseID:WBGene00017989 Length:754 Species:Caenorhabditis elegans


Alignment Length:766 Identity:289/766 - (37%)
Similarity:458/766 - (59%) Gaps:73/766 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVNEVNDVKIYNLSAGKSVPDWLTDRRKRSQLMKKVDSRRQIELIQDFDMPGVCTSIRMSPDQQ 65
            |.|:.||||||||||||||:|:|::.|.:|....:..|.|::|:|||||:||.|..::.::||.:
 Worm     1 MEVSTVNDVKIYNLSAGKSLPEWMSSRTRRKLEQRNTDVRQRIQLIQDFEMPDVSNTVNITPDGK 65

  Fly    66 YILATGTYKPRVKCFEVSNLSIKFERCFDAEVTTFEVISDDYSKMVFLQCDRYVEIHAAHGRHYR 130
            |:.|:|.|||.::|::::|||:||||..||:|.....:||||||:|.|:.:|::|:||..||::|
 Worm    66 YVWASGNYKPWLRCYDLNNLSLKFERGLDADVIKLIPLSDDYSKVVILEEERWIEMHAMLGRYFR 130

  Fly   131 LRIPRFGRDMKYHKPSCDMFIVGVGRDIFRLNLERGQFLQPFETDGSCLNACEVNPEHHLLVAGT 195
            :|:|..||||...:.|.|:::||...:::|.|||:|.:|.|||:... ||..:|..||.|:..||
 Worm   131 MRMPCQGRDMALSEESSDLYLVGSKSEVYRFNLEQGCWLTPFESTAP-LNCVQVCTEHQLICCGT 194

  Fly   196 KEGTVEAWDPRTKQRCSTLDVAMKLP---GVKEFPSVTALKFRNGLHMGVGTASGHVLIYDIRAK 257
            ..|.|||||.|.|..|.|||....:.   |..:..:||::.|.:.||:||||::|.:||||:||:
 Worm   195 TNGVVEAWDHRDKSLCGTLDAGSSVNSHIGENQKVAVTSVAFSDPLHIGVGTSTGQILIYDLRAR 259

  Fly   258 QPLLVKNHLNRLPIKRLAF--NPAQNAVYSLDEATLKLWDEQTGKQIAYVESTSSFNDFCTIPDT 320
            :|||:|:|.|.|||.:|.|  ....:.|.|:|...:|||.|:.|..:|.:|:|...||||..|::
 Worm   260 RPLLIKDHNNELPINKLDFIKRDDGDVVASMDSRMMKLWHEEDGSPMAAIENTCPLNDFCRFPNS 324

  Fly   321 GMFFVAQEDVKMMTYYVPAMGPAPRWCSFLDNLTEEIESEVVENVYDDYQFVTAKELAELGMEHL 385
            ||||.|.|..||:.|::|.:||||:|||:|:|||||:| |....|||:|:|||.|:|.:||:..|
 Worm   325 GMFFFANEAPKMLQYFIPQLGPAPKWCSYLENLTEEME-ETETTVYDNYRFVTKKQLDDLGLSGL 388

  Fly   386 VGSNLLKGYMHGYFMDARLYNKAKAVVEPFAFDRFRKDKIRQEIESERKS---RLQIESKLPKVN 447
            :|:|:|:.||||||:||||||||:..::|||:::::.:||:..|..||:.   :.::| |||.||
 Worm   389 IGTNVLRAYMHGYFIDARLYNKAQTQMQPFAYEKYKDEKIKSMIADEREESAVKKKVE-KLPAVN 452

  Fly   448 KELALKIMDEQANPSN-----------SAKQRNVPSLLEDSRFKAMFENADFEVNKSAEEYRLLA 501
            |.||.::.|| |:.:|           |.|.....|||.|.|||.:||:.||||::::|::...|
 Worm   453 KALAARLRDE-ASAANQKAETKKEKKKSKKSDAATSLLADDRFKKLFESEDFEVDETSEQFLKNA 516

  Fly   502 PVLNRLDKSKAKELKKRVEVAHVAELHADEAQQREESDNDEDLFGFEKSDGETKDDSG------- 559
            .:..::      :.|..|||    |...:|::..:.||::.:..|   ||.|.|..:.       
 Worm   517 SIAQKM------KAKGPVEV----ESEGEESEDNDASDSENEASG---SDSEPKGSASWMVEENR 568

  Fly   560 --------DEASSDDD------DRREYVKEMKQAYKQVKR-----QREEEEELEDDEQQPDEISD 605
                    :.||||:|      .:|..|:..|::.:.:::     :|:|.:::..:::|..:.|.
 Worm   569 EVDMASDLESASSDEDIDQSLKAKRAKVRAAKKSERNIQKSQKYDERKEAKKIRKEQRQLSKPSK 633

  Fly   606 TAKRPQTNGHSQQPTTNGNRFTMTPLDQHQGSSLLQQRIKKASLQDRVRVMSQLEGQVTNVGRSL 670
            ........|.:.:...:.........| ::.|..|..|.:..:..||      ...:|.:.....
 Worm   634 FVLHSIGTGETTRKFVDETVAVRDDAD-NKDSMALGARKRATARSDR------KTKKVNDDDVPF 691

  Fly   671 GNRQMTFEVNKQKKSQFHAKKREAEMKKHREERRSIVRPIKSL---RLKKV 718
            |.|:|||.::|:.| ...|:..:.:...|..||:.:.|...:|   .|||:
 Worm   692 GGREMTFTISKRDK-DLRAEAAKTKQAAHAAERKEVSRRPNALVTKGLKKL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FdNP_609711.1 WD40 <38..338 CDD:225201 137/304 (45%)
WD40 <56..214 CDD:295369 70/157 (45%)
WD40 <149..329 CDD:295369 80/184 (43%)
WD40 repeat 179..215 CDD:293791 18/35 (51%)
WD40 repeat 230..264 CDD:293791 18/33 (55%)
WD40 repeat 271..305 CDD:293791 12/35 (34%)
BTV_NS2 <396..584 CDD:282383 71/222 (32%)
NUC153 476..503 CDD:285385 12/26 (46%)
nol-10NP_501233.1 WD40 repeat 139..171 CDD:293791 12/31 (39%)
WD40 <175..310 CDD:392136 57/135 (42%)
WD40 repeat 178..214 CDD:293791 18/35 (51%)
WD40 repeat 231..266 CDD:293791 19/34 (56%)
WD40 repeat 273..298 CDD:293791 7/24 (29%)
PTZ00108 <419..664 CDD:240271 63/260 (24%)
NUC153 491..>514 CDD:369723 11/22 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164103
Domainoid 1 1.000 459 1.000 Domainoid score I243
eggNOG 1 0.900 - - E1_KOG2321
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5998
Inparanoid 1 1.050 504 1.000 Inparanoid score I735
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53939
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003665
OrthoInspector 1 1.000 - - oto17279
orthoMCL 1 0.900 - - OOG6_102419
Panther 1 1.100 - - LDO PTHR14927
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R825
SonicParanoid 1 1.000 - - X2538
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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