DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and frrs1b

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_073797018.1 Gene:frrs1b / 557898 ZFINID:ZDB-GENE-080917-44 Length:609 Species:Danio rerio


Alignment Length:159 Identity:58/159 - (36%)
Similarity:85/159 - (53%) Gaps:13/159 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRLLVLAACLAISVHAYSDGAPKAACRDLTPQHGAKLQVTKPPYSISGPSHVRS---DQKLTLT 62
            |:.:|:|....:.:|..||||....||.|:|||||...:.|.||:.|:......|   :.|:||.
Zfish     3 MWIVLLLLLIHSETVLCYSDGNVVVACEDMTPQHGYDPKTTDPPFIITADKSQFSPGDEVKVTLA 67

  Fly    63 LGGDE----FLGFMIQARD--GQNRVVGQFQVVDSVHSQTLDCSGK-DDTITHLSAQKGKPLTGI 120
            :|..|    |.||:|:||:  ..|.:||.|:::.|..||.|.|:.| |..::|.|   ||..|.:
Zfish    68 MGFSEGKKYFKGFLIEARNAGNLNEIVGSFKLISSDLSQLLTCNNKRDSAVSHTS---GKHKTEV 129

  Fly   121 TFDWIPPAGYKGNVKFMATVVQTGFVYWV 149
            ...|:.|.....:|:|:.||.|....|||
Zfish   130 QVIWVAPPDSPSSVQFLVTVAQGMHDYWV 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 47/131 (36%)
frrs1bXP_073797018.1 None

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