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Protein Alignment l(2)34Fc and frrs1b
DIOPT Version :9
Sequence 1: | NP_001285930.1 |
Gene: | l(2)34Fc / 34838 |
FlyBaseID: | FBgn0261534 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017209487.1 |
Gene: | frrs1b / 557898 |
ZFINID: | ZDB-GENE-080917-44 |
Length: | 609 |
Species: | Danio rerio |
Alignment Length: | 159 |
Identity: | 58/159 - (36%) |
Similarity: | 85/159 - (53%) |
Gaps: | 13/159 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFRLLVLAACLAISVHAYSDGAPKAACRDLTPQHGAKLQVTKPPYSISGPSHVRS---DQKLTLT 62
|:.:|:|....:.:|..||||....||.|:|||||...:.|.||:.|:......| :.|:||.
Zfish 3 MWIVLLLLLIHSETVLCYSDGNVVVACEDMTPQHGYDPKTTDPPFIITADKSQFSPGDEVKVTLA 67
Fly 63 LGGDE----FLGFMIQARD--GQNRVVGQFQVVDSVHSQTLDCSGK-DDTITHLSAQKGKPLTGI 120
:|..| |.||:|:||: ..|.:||.|:::.|..||.|.|:.| |..::|.| ||..|.:
Zfish 68 MGFSEGKKYFKGFLIEARNAGNLNEIVGSFKLISSDLSQLLTCNNKRDSAVSHTS---GKHKTEV 129
Fly 121 TFDWIPPAGYKGNVKFMATVVQTGFVYWV 149
...|:.|.....:|:|:.||.|....|||
Zfish 130 QVIWVAPPDSPSSVQFLVTVAQGMHDYWV 158
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
l(2)34Fc | NP_001285930.1 |
Reeler |
27..149 |
CDD:280232 |
47/131 (36%) |
frrs1b | XP_017209487.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170574266 |
Domainoid |
1 |
1.000 |
79 |
1.000 |
Domainoid score |
I8666 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001198 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45828 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.940 |
|
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