DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)34Fc and Frrs1l

DIOPT Version :9

Sequence 1:NP_001285930.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001136437.1 Gene:Frrs1l / 230235 MGIID:2442704 Length:293 Species:Mus musculus


Alignment Length:87 Identity:22/87 - (25%)
Similarity:33/87 - (37%) Gaps:43/87 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SDQKLTLTLGGDEFLGFM--------IQ----------------ARDGQ-----NRVVGQFQVVD 90
            ||:|    :|||:.:..:        ||                |||.:     |||..:|:...
Mouse   150 SDKK----MGGDDVMACVHDDNGRVRIQHFYNVGQWAKEVQRNPARDEEGVFENNRVTCRFKRPV 210

  Fly    91 SVHSQTLDCSGKDDTIT--HLS 110
            :|        .:|:||.  |||
Mouse   211 NV--------PRDETIVDLHLS 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_001285930.1 Reeler 27..149 CDD:280232 22/87 (25%)
Frrs1lNP_001136437.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..60
DOMON_SDR_2_like 94..253 CDD:187686 22/87 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831296
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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