DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and Y57G11A.4

DIOPT Version :9

Sequence 1:NP_001285930.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_502754.3 Gene:Y57G11A.4 / 190363 WormBaseID:WBGene00013292 Length:262 Species:Caenorhabditis elegans


Alignment Length:92 Identity:20/92 - (21%)
Similarity:32/92 - (34%) Gaps:30/92 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRLLV--LAACLAISVHAYSDGA---------PKAACRDLTPQHGAKLQVTKPPYSISGPSHVR- 54
            |.|||  |.|.||.::...|.|.         |:....:|....|..|       |:..|:.:: 
 Worm     4 FALLVVSLLANLADAIFIDSTGCGTTKMCMFRPRGCDPNLDCTIGVAL-------SVIAPNRMKV 61

  Fly    55 -----------SDQKLTLTLGGDEFLG 70
                       ..|.:.:....|:|:|
 Worm    62 QMVAATIVPAVQQQYVAIAFSHDKFMG 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_001285930.1 Reeler 27..149 CDD:280232 9/56 (16%)
Y57G11A.4NP_502754.3 DOMON_SDR_2_like 21..200 CDD:187686 12/75 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156361
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001198
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45828
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

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