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Protein Alignment l(2)34Fc and F23B12.4
DIOPT Version :9
| Sequence 1: | NP_001285930.1 |
Gene: | l(2)34Fc / 34838 |
FlyBaseID: | FBgn0261534 |
Length: | 159 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001122926.2 |
Gene: | F23B12.4 / 179944 |
WormBaseID: | WBGene00009081 |
Length: | 370 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 170 |
Identity: | 52/170 - (30%) |
| Similarity: | 70/170 - (41%) |
Gaps: | 32/170 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 LLVLAACLAISVHAYSDGAP--KAACRDLTP----QHGAKLQVTKPPYSISGPSHVRSDQK---- 58
||.|.|.:.:.| |:.|||| .||...:.| :|...||::.|||.|: .|||
Worm 5 LLFLVALVPVVV-AWPDGAPCVHAAFESMNPLEAVEHQGGLQLSTPPYEIA------VDQKCYWR 62
Fly 59 ---LTLTLGGDE----FLGFMIQA----RDGQNRVVGQFQVVDSVHSQTLDCSGKDDTITHLSAQ 112
:.|||.|.. |.||:||. .|......||...:|...|....|.....:.||...:
Worm 63 NQPIGLTLQGHNESIWFKGFVIQPFKWNNDQLGERFGQLVRLDDNGSWQQQCFRYQVSATHSHDE 127
Fly 113 KGKPLTGITFDWIPPAGYKGNVKFMATVVQTGFVYWVGRV 152
|.|.:. .|.........|:|:||||:....:||..|
Worm 128 KKKHIK----MWWKVDDEVDTVQFVATVVKHQTQFWVKSV 163
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| l(2)34Fc | NP_001285930.1 |
Reeler |
27..149 |
CDD:280232 |
37/140 (26%) |
| F23B12.4 | NP_001122926.2 |
Reeler |
40..169 |
CDD:260081 |
39/134 (29%) |
| ShK |
330..367 |
CDD:279838 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1223313at2759 |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_108549 |
| Panther |
1 |
1.100 |
- |
- |
O |
PTHR45828 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.920 |
|
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