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Protein Alignment l(2)34Fc and reeld1
DIOPT Version :9
Sequence 1: | NP_001285930.1 |
Gene: | l(2)34Fc / 34838 |
FlyBaseID: | FBgn0261534 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_031751366.1 |
Gene: | reeld1 / 100485235 |
-ID: | - |
Length: | 524 |
Species: | Xenopus tropicalis |
Alignment Length: | 158 |
Identity: | 51/158 - (32%) |
Similarity: | 77/158 - (48%) |
Gaps: | 25/158 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LLVLAACLAISVHAYSDGAPKAACRDLTPQH-GAKLQVTKPPYSISGPSHVRSDQKLTLTLGGD- 66
|...:.||.....|:|.||..:||.|:.|:| .|:.|..|..|.. :|::: |..|.||
Frog 39 LACASVCLISYSAAFSHGASLSACSDMRPKHIRAQPQNPKKNYIA-----IRTNR--TSYLPGDT 96
Fly 67 ---------EFLGFMIQARDGQN-RVVGQFQVVDSVHSQTLDCSGKDDTITHLSAQKGKPL-TGI 120
:|:||::|||...| :|.|.|..:.. .::.|.|....||:|| ..|.| ..:
Frog 97 VPVTIRSSRDFMGFLLQARRISNDQVAGSFVFIPP-GAKLLHCFEDGDTVTH----SDKSLKRNL 156
Fly 121 TFDWIPPAGYKGNVKFMATVVQTGFVYW 148
:|.|..|....|:::|..:|||:.||||
Frog 157 SFVWKSPDQPVGDIRFFLSVVQSYFVYW 184
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
l(2)34Fc | NP_001285930.1 |
Reeler |
27..149 |
CDD:280232 |
43/135 (32%) |
reeld1 | XP_031751366.1 |
Reeler |
62..184 |
CDD:396550 |
41/133 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45828 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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