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Protein Alignment l(2)34Fc and si:ch73-14h1.2
DIOPT Version :9
Sequence 1: | NP_001285930.1 |
Gene: | l(2)34Fc / 34838 |
FlyBaseID: | FBgn0261534 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003197897.1 |
Gene: | si:ch73-14h1.2 / 100004603 |
ZFINID: | ZDB-GENE-070912-263 |
Length: | 326 |
Species: | Danio rerio |
Alignment Length: | 154 |
Identity: | 51/154 - (33%) |
Similarity: | 75/154 - (48%) |
Gaps: | 11/154 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 FRLLVLAACLAISVHAYSDGAPKAACRDLTPQHGAKLQVTK--PPYSISGPSHVRSD-QKLTLTL 63
|.|||....|. :|.||..|.....|..:.|.|......|. .||:::......:| |.:|:||
Zfish 76 FVLLVFVLNLQ-AVTAYPHGRVSGVCSSMVPGHNGTYSSTNLDSPYTVTSDVLYYTDGQVITVTL 139
Fly 64 GGD--EFLGFMIQARDGQNRVVGQFQVVDSVHSQTLDCSGKDDTITHLSAQKGKPLTGITFDWIP 126
.|: ||.||::|||:|. ..||.|.:|.: .||.|:|..:...::|.|:.. .:.:...|..
Zfish 140 QGNNTEFRGFLLQARNGM-EPVGTFTIVGN-SSQLLNCGTEGSAVSHNSSTL---KSTVVAQWNA 199
Fly 127 PAGYKGNVKFMATVVQTGFVYWVG 150
|.....:::|.||.||...|||||
Zfish 200 PNINNTDIQFRATFVQNFSVYWVG 223
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
l(2)34Fc | NP_001285930.1 |
Reeler |
27..149 |
CDD:280232 |
39/126 (31%) |
si:ch73-14h1.2 | XP_003197897.1 |
Reeler |
100..222 |
CDD:280232 |
39/126 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_2E0SP |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45828 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.870 |
|
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