DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and CG17242

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001259921.1 Gene:CG17242 / 59226 FlyBaseID:FBgn0250841 Length:245 Species:Drosophila melanogaster


Alignment Length:249 Identity:89/249 - (35%)
Similarity:132/249 - (53%) Gaps:33/249 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITA 65
            |.::..|||:::..::|           ..:.||||:||||.|:|.:.||.|||.|||.|||:|.
  Fly     1 MLLKGILLLVSIAQIAA-----------DFKSIGIEQAPWQASVQINDKHHCGGVIYSEDIILTI 54

  Fly    66 AHCVQG---QGYQVRAGSALKNSNGSVVDVAAIRTHEGLG---NDIAIVRLSKPLEFTNQVQPIP 124
            |.||:.   :...||.|||.:|:.|:|:.|..:|. :.||   :|:||::|..||.....::.||
  Fly    55 AECVRKARLEFISVRVGSAQENAGGTVLKVEKMRL-QVLGLRPSDVAILQLRSPLYLDGGIRAIP 118

  Fly   125 LAKTNPPPGSIAFVSGWGSSSYYSHPID-LQGVNLYIQWPYYCG--------LTEPSRICAGSFG 180
            ||.....||:.|.|||||..|..:...: |..|::.||....|.        |.....|||...|
  Fly   119 LATIPLVPGTNASVSGWGQLSAMNPSSEVLLRVDVKIQDQLMCATNLALKGRLMSVGEICAAPAG 183

  Fly   181 RA--ACKGDSGGPLVFDQQLVGVVSGGTKDC---TYSSIYTSVPYFREWILNAI 229
            ..  ||:|..|||||.:.:|.|::|..:. |   ..||:|.::..|:.||.:.:
  Fly   184 EIPYACQGFVGGPLVANNRLYGILSWQSA-CDVLNKSSVYANIAMFKVWIESTV 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 82/218 (38%)
Tryp_SPc 27..225 CDD:238113 82/217 (38%)
CG17242NP_001259921.1 Tryp_SPc 24..235 CDD:238113 82/212 (39%)
Tryp_SPc 24..232 CDD:214473 80/209 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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