DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and CG17239

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001259920.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:249 Identity:99/249 - (39%)
Similarity:139/249 - (55%) Gaps:22/249 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITA 65
            ||:|...|..::..:|:..:   .|||:||..|.|...|||.||.|.|:..||.:|||.||:|||
  Fly     1 MFVQWIFLAFSVTVVSSNWI---PERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITA 62

  Fly    66 AHCV---QGQGYQVRAGSALKNSNGSVVDVAAIRTHE----GLGNDIAIVRLSKPLEFTNQVQPI 123
            |||:   :.:...||.||:.....|.||.|:::..||    ...||||::||...|...:.|..|
  Fly    63 AHCLTDRETEFLSVRVGSSFTFFGGQVVRVSSVLLHEEYDQSWSNDIAVMRLQSKLRLGSAVSVI 127

  Fly   124 PLAKTNPPPGSIAFVSGWGSSSY-YSHPIDLQGVNLYI------QWPYYCGLTEPSRICAGSFGR 181
            |||.|.|..||.|.|||||:..: .::|:.:...::.|      :..|...:|: ..|||.:.|:
  Fly   128 PLADTPPASGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITK-DMICAAAPGK 191

  Fly   182 AACKGDSGGPLVFDQQLVGVVSGGTKDCT---YSSIYTSVPYFREWILNAIDEI 232
            .||.||||||||...:|||:||.| |:|.   |..:|.:|...:.|||.||:.|
  Fly   192 DACSGDSGGPLVSGNKLVGIVSFG-KECAHPEYPGVYANVAELKPWILGAIERI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 87/215 (40%)
Tryp_SPc 27..225 CDD:238113 86/214 (40%)
CG17239NP_001259920.1 Tryp_SPc 23..237 CDD:214473 87/215 (40%)
Tryp_SPc 24..237 CDD:238113 86/214 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG25744
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.020

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