DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and CG17239

DIOPT Version :10

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:249 Identity:99/249 - (39%)
Similarity:139/249 - (55%) Gaps:22/249 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITA 65
            ||:|...|..::..:|:..:   .|||:||..|.|...|||.||.|.|:..||.:|||.||:|||
  Fly     1 MFVQWIFLAFSVTVVSSNWI---PERIVGGDLITILSVPWQASILRLGRFHCGAAIYSEDIVITA 62

  Fly    66 AHCV---QGQGYQVRAGSALKNSNGSVVDVAAIRTHE----GLGNDIAIVRLSKPLEFTNQVQPI 123
            |||:   :.:...||.||:.....|.||.|:::..||    ...||||::||...|...:.|..|
  Fly    63 AHCLTDRETEFLSVRVGSSFTFFGGQVVRVSSVLLHEEYDQSWSNDIAVMRLQSKLRLGSAVSVI 127

  Fly   124 PLAKTNPPPGSIAFVSGWGSSSY-YSHPIDLQGVNLYI------QWPYYCGLTEPSRICAGSFGR 181
            |||.|.|..||.|.|||||:..: .::|:.:...::.|      :..|...:|: ..|||.:.|:
  Fly   128 PLADTPPASGSPATVSGWGAIGFKKNYPMSILSASVDIVDQDQCRRSYGRKITK-DMICAAAPGK 191

  Fly   182 AACKGDSGGPLVFDQQLVGVVSGGTKDCT---YSSIYTSVPYFREWILNAIDEI 232
            .||.||||||||...:|||:||.| |:|.   |..:|.:|...:.|||.||:.|
  Fly   192 DACSGDSGGPLVSGNKLVGIVSFG-KECAHPEYPGVYANVAELKPWILGAIERI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 87/215 (40%)
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 86/214 (40%)

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