DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and LOC558805

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_021329158.1 Gene:LOC558805 / 558805 -ID:- Length:255 Species:Danio rerio


Alignment Length:255 Identity:71/255 - (27%)
Similarity:109/255 - (42%) Gaps:39/255 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITAAHCV 69
            |.||.:.|.||:.......:  ||.|:........:..|:|.:|:|.|||.:.....::|||||.
Zfish     6 SLLLSVTLISLALTGAFGAD--IINGKKAKKSSLLYMASVQINGEHKCGGFLIDPSYVLTAAHCN 68

  Fly    70 QGQGYQVRAGS---ALKNSNGSVVDVAAIRTHEG-----LGNDIAIVRLSKPLEFTNQVQPIPLA 126
            :.....|..|:   :.|.:|.....|.....|..     .|.||.:::|.|.::....|:.:.:.
Zfish    69 KQGNMSVILGTHDISPKGTNVKRYRVQNKHIHPSYKSVKTGKDIMLLKLYKKVKIGKDVKLVTIP 133

  Fly   127 KTNPP--PGSIAFVSGWGSSSYYSHPIDL-------------QGV--NLYIQWPYYCGLTEPSRI 174
            ..:.|  |.|...|:|||.:...:...||             |.|  .:.::.|       .:.:
Zfish   134 SKDKPLKPKSKCLVAGWGKTEKDNTVNDLLVTDVLTINKTVCQSVWKKINVELP-------DNIL 191

  Fly   175 CAGSF--GRAACKGDSGGPLVFDQQLVGVVSGGTKDCTY---SSIYTSVPYFREWILNAI 229
            |||.:  ...||:||||||||...|.||:||.....|.|   .:|||.:..:..||...|
Zfish   192 CAGGYETKSGACQGDSGGPLVCSGQAVGIVSFNMGRCDYPNTPNIYTQISKYTHWIKKVI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 62/228 (27%)
Tryp_SPc 27..225 CDD:238113 62/227 (27%)
LOC558805XP_021329158.1 Tryp_SPc 26..250 CDD:238113 64/230 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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