DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Mcpt9

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_062196.2 Gene:Mcpt9 / 54272 RGDID:3068 Length:248 Species:Rattus norvegicus


Alignment Length:247 Identity:71/247 - (28%)
Similarity:114/247 - (46%) Gaps:31/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSI----QRDGKHLCGGSIYSADI 61
            ||:..|.|:..|      ||......|:.|........|:...|    .....:.|||.:.:.||
  Rat     1 MFLFLFFLVAVL------PVNTEGGEILWGTESKPHSRPYMAFINFYDSNSDLNRCGGFLVAKDI 59

  Fly    62 IITAAHCVQGQGYQVRAG--SALKNSNGSVVDVAAIRTHE-----GLGNDIAIVRLSKPLEFTNQ 119
            ::||||| .|:..:|..|  :..|..|..|:.|...:.||     .|.|||.:::|.:..:....
  Rat    60 VMTAAHC-NGRNIKVILGAHNIKKRENTQVISVLKAKPHENFNSDSLVNDIMLLKLERKAQLNGV 123

  Fly   120 VQPIPLAKTNP--PPGSIAFVSGWGSSSYYSHPIDLQGVNLYIQWPYYC-GLT----EPSRICAG 177
            |:.|.|.::..  .||.:..|:|||:.:..:....||.|||.:|....| |::    :..::|.|
  Rat   124 VKTIALPRSQDWVKPGQVCTVAGWGTLANCTLSNTLQEVNLEVQKGQKCQGMSRNYNDSIQLCVG 188

  Fly   178 SFG--RAACKGDSGGPLVFDQQLVGVVSGGTKDCTYS--SIYTSVPYFREWI 225
            :..  :|...||||||.|.:....|:||  .:.||::  .::|.:..|..||
  Rat   189 NPNERKATAGGDSGGPFVCNGVAQGIVS--YRLCTWTPPRVFTRISSFIPWI 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 62/220 (28%)
Tryp_SPc 27..225 CDD:238113 62/219 (28%)
Mcpt9NP_062196.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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