DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Prss53

DIOPT Version :10

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_006230384.1 Gene:Prss53 / 499270 RGDID:1566127 Length:591 Species:Rattus norvegicus


Alignment Length:243 Identity:63/243 - (25%)
Similarity:106/243 - (43%) Gaps:39/243 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITAAHCVQG--- 71
            :|..|||:|          |.|...:.:.||...::..||..|||::.|..:::|||||..|   
  Rat   333 VACGSLSSG----------GPQAGALSQWPWDARLKHHGKLACGGALVSEVVVLTAAHCFIGRQT 387

  Fly    72 -QGYQVRAGSALKNSNGSVVDVAAIRTHEGLGNDIAIVRLSKPLEFTNQVQP--IPLAKTNPPPG 133
             :.:.|..|:..:......:.:....||...|:|:|.:.|::|:.....::|  :|.|....|.|
  Rat   388 LEEWSVGLGAGPEEWGLKQLILHGAYTHPEGGHDVAFLLLAQPVTLGPGLRPLCLPYADHRLPDG 452

  Fly   134 SIAFVSGWGSSSYYSHPIDLQGVNLYIQWPYYC-------GLTE----PSRICAGSFGRAA-CKG 186
            ...:|.|....:..:||   ..|.:.:..|..|       |.|.    |..||....|... |:|
  Rat   453 EHGWVLGLTREAGINHP---HTVPVTVLGPMACSRQHAASGSTGVPILPGMICTTVVGEPPHCEG 514

  Fly   187 DSGGPLVFDQQ----LVGVVSGGTKDCTYS---SIYTSVPYFREWILN 227
            .||.|||.:.:    |.|:.|.| ..|..|   :::.::..:.:|:.|
  Rat   515 LSGAPLVHEIRGTWFLAGLHSFG-DTCQGSAKPAVFAALSAYEDWVSN 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 56/223 (25%)
Prss53XP_006230384.1 Tryp_SPc 45..310 CDD:238113
Tryp_SPc 341..561 CDD:238113 58/233 (25%)
Blue background indicates that the domain is not in the aligned region.

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