DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and CG34130

DIOPT Version :10

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001036759.1 Gene:CG34130 / 4379866 FlyBaseID:FBgn0083966 Length:297 Species:Drosophila melanogaster


Alignment Length:243 Identity:60/243 - (24%)
Similarity:95/243 - (39%) Gaps:45/243 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RPEERIIGGQPI----GIEEAPWQVSIQRDGKHLCGGSIYSADIIITAAHCVQGQGYQVRAGSAL 82
            ||..|.:....|    |....||.:.|......:||.|..||...:|:|:|:.....|:.:.|..
  Fly    35 RPPVRTLNKNGIRRTSGGHAVPWLLRIVDGPTFVCGASYLSALYALTSANCMHSHRSQMESLSVE 99

  Fly    83 KNSNGSVVDVAAIRTHE------------------GLGNDIAIVRLSKPLEFTNQVQPIPLAKTN 129
            ..|:.|..| ..:.:|:                  |...|:|::.|:..|. .|:...:.|. ||
  Fly   100 LVSSDSRQD-NQLDSHDPPNALIRNIIVSKDWHWPGTFMDVAVIELTNRLR-GNRNNYVTLC-TN 161

  Fly   130 PPPGSIAFVSGWGSSSYYSHPI---------DLQGVNLYI-QWPYYCGLTEPSRICAGSFGRAA- 183
            |       :|.:.|.|..|:..         :::.:|..| ...|...|...:..||..|.|:| 
  Fly   162 P-------LSSYKSLSVVSYGAGPAENVRTEEIEVLNRMICDSAYGNFLLRETVACAKEFKRSAD 219

  Fly   184 CKGDSGGPLVFDQQLVGVV--SGGTKDCTYSSIYTSVPYFREWILNAI 229
            |...:|.|:....||.|:|  |...|......|:|.:...:.:||.||
  Fly   220 CMFSAGCPVTAGDQLCGIVAWSPACKRSNLPGIFTDIHQVKRFILKAI 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 54/233 (23%)
CG34130NP_001036759.1 Trypsin 53..263 CDD:459667 51/219 (23%)

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