DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Mcpt1l3

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_038949770.1 Gene:Mcpt1l3 / 408209 RGDID:1302933 Length:270 Species:Rattus norvegicus


Alignment Length:247 Identity:62/247 - (25%)
Similarity:114/247 - (46%) Gaps:49/247 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PEERIIGGQPIGIEEAP--------WQVSIQRDGKHLCGGSIYSADIIITAAHCVQGQGYQVRAG 79
            ||| |:|    |:|..|        .:::.::.....|||.:.|...::||||| .|:...|..|
  Rat    39 PEE-IVG----GVESIPHSRPYMAHLKITTEKGYVTFCGGFLISRQFVLTAAHC-NGREITVTLG 97

  Fly    80 S---ALKNSNGSVVDVAAIRTHEGLG-----NDIAIVRLSKPLEFTNQVQPIPLAKTNP--PPGS 134
            :   :.:.|....:.|.....|:...     :||.:::|.|.:|.|..|..:||...:.  .||:
  Rat    98 AHDVSKRESTQQKLKVEKQIIHKNYNFFSNIHDIMLLKLEKQVELTPAVDVVPLPSPSDFIDPGT 162

  Fly   135 IAFVSGWGSS-----SYYSHPI--------DLQGVNLYIQWPYYCGLTEPSRICAGSFG--RAAC 184
            :...:|||.:     :.|::.:        |::...::..:.|      ..::|.||.|  |:..
  Rat   163 MCQAAGWGQTGVTDPTSYTYTLREVELRIMDVEACKIFSDYDY------NFQMCVGSPGRMRSPY 221

  Fly   185 KGDSGGPLVFDQQLVGVVSGGTKDCTYSSIYTSVPYFREWILNAIDEIMSAN 236
            :|||||||:......|:||.|.:|....:::|.:..:..|    |:.::||:
  Rat   222 EGDSGGPLLCAGVAHGIVSHGREDAKPPAVFTRISPYVPW----INIVLSAS 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 55/231 (24%)
Tryp_SPc 27..225 CDD:238113 55/230 (24%)
Mcpt1l3XP_038949770.1 Tryp_SPc 42..263 CDD:238113 56/235 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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