DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and CG17571

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001286096.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster


Alignment Length:254 Identity:95/254 - (37%)
Similarity:140/254 - (55%) Gaps:29/254 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLALNSLSA----GPVIR-PEERIIGGQPIGIEEAPWQVSIQ-RDGKHLCGGSIYSADIIITA 65
            |.::||.:|:|    .|.:. |..||:.|:.:.||..|:|||:| ..|.|.||||:..::.::||
  Fly     6 LSVVALVALAASCHGNPGLDFPFGRIVNGEDVDIENYPYQVSVQTTKGSHFCGGSLIDSETVLTA 70

  Fly    66 AHCVQGQG---YQVRAGSALKNSNGSVVDVAAIRTHEGLG-----NDIAIVRLSKPLEFTNQVQP 122
            |||:|...   .|||.||..::|.|.||.|.|.:.|||..     ||:||::||.|:..|::::.
  Fly    71 AHCMQSYAASELQVRVGSTSRSSGGEVVTVRAFKYHEGYNSKLMINDVAIIKLSSPVRQTSKIRA 135

  Fly   123 IPLAKTNPPPGSIAFVSGWGSSSYY--SHPIDLQGVNLYI---------QWPYYCGLTEPSRICA 176
            |.||.:....|:.|.|||||::.:.  |.|..||.|.:.:         .:.|.......:.:||
  Fly   136 IELADSEAVSGTNAVVSGWGTTCFLFCSSPDTLQKVEVDLLHYKDCAADTYNYGSDSILETMVCA 200

  Fly   177 GSFGRAACKGDSGGPLVFDQQLVGVVSGGTKDCT---YSSIYTSVPYFREWILNAIDEI 232
            ....:.||:||||||||.|.:||||||.|: .|.   |..:|..|...|.||::..|.:
  Fly   201 TGEKKDACQGDSGGPLVADNKLVGVVSWGS-GCAWTGYPGVYADVASLRSWIVDTTDSL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 85/221 (38%)
Tryp_SPc 27..225 CDD:238113 84/220 (38%)
CG17571NP_001286096.1 Tryp_SPc 30..251 CDD:214473 85/221 (38%)
Tryp_SPc 31..254 CDD:238113 86/223 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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