DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Mcpt1

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_058841.1 Gene:Mcpt1 / 29265 RGDID:3062 Length:247 Species:Rattus norvegicus


Alignment Length:254 Identity:70/254 - (27%)
Similarity:113/254 - (44%) Gaps:34/254 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAP--------WQVSIQRDGKHLCGGSIYSA 59
            :|:.|.|:|| .|.:|   ...|.|||    |:|..|        ..:..:|..|..|||.:.:.
  Rat     1 MQALLFLMAL-LLPSG---AGAEEIIG----GVESIPHSRPYMAHLDIITERGLKDSCGGFLITR 57

  Fly    60 DIIITAAHCVQGQGYQVRAGS---ALKNSNGSVVDVAAIRTHEGLG-----NDIAIVRLSKPLEF 116
            ..::||||| :|:...|..|:   :.:......:.|.....|:...     :||.:::|.|.:|.
  Rat    58 QFVLTAAHC-RGREITVTLGAHDVSKREYTQQKIKVEKQFIHKNYNFLPNLHDIMLLKLEKQVEL 121

  Fly   117 TNQVQPIPLAKTNP--PPGSIAFVSGWGSSSYYSHPID-LQGVNLYIQWPYYCGL----TEPSRI 174
            |..|..:||...:.  .||::.:.:|||.:.......| |:.|.|.|.....|.:    ....::
  Rat   122 TPAVDVVPLPSPSDFIHPGTLCWTAGWGRTGVKDPTSDTLREVALRIMDEEACKIYRHYDNNFQV 186

  Fly   175 CAGSFGR--AACKGDSGGPLVFDQQLVGVVSGGTKDCTYSSIYTSVPYFREWILNAIDE 231
            |.|...|  .|..|||||||:....:.|:||.|..|.|..:::|.:..:..||...:.|
  Rat   187 CVGLSTRLQTAYTGDSGGPLLCAGVVHGIVSYGHPDATPPAVFTRIAPYVPWINTVLRE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 59/223 (26%)
Tryp_SPc 27..225 CDD:238113 59/222 (27%)
Mcpt1NP_058841.1 Tryp_SPc 20..239 CDD:214473 59/223 (26%)
Tryp_SPc 21..242 CDD:238113 61/225 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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