DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Cma1

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_034910.2 Gene:Cma1 / 17228 MGIID:96941 Length:247 Species:Mus musculus


Alignment Length:242 Identity:68/242 - (28%)
Similarity:109/242 - (45%) Gaps:21/242 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITAAHCVQG 71
            ||||..:|..||.:|...|.|...:|.   .|..::....:....|.|.:...:.::|||||. |
Mouse     9 LLLLLGSSTKAGEIIGGTECIPHSRPY---MAYLEIVTSENYLSACSGFLIRRNFVLTAAHCA-G 69

  Fly    72 QGYQVRAGSALKNSNGSV---VDVAAIRTH----EGL-GNDIAIVRLSKPLEFTNQVQPIPL-AK 127
            :...|..|:..|.|....   ::|.....|    |.| .:||.:::|.:..:.|..|..:|| |.
Mouse    70 RSITVLLGAHNKTSKEDTWQKLEVEKQFLHPKYDENLVVHDIMLLKLKEKAKLTLGVGTLPLSAN 134

  Fly   128 TN-PPPGSIAFVSGWGSSSYYSHPID-LQGVNLYIQWPYYC----GLTEPSRICAGSFGRA--AC 184
            .| .|||.:....|||.::......| ||.|.:.:|.|..|    .....|::|.|:..:.  ..
Mouse   135 FNFIPPGRMCRAVGWGRTNVNEPASDTLQEVKMRLQEPQACKHFTSFRHNSQLCVGNPKKMQNVY 199

  Fly   185 KGDSGGPLVFDQQLVGVVSGGTKDCTYSSIYTSVPYFREWILNAIDE 231
            ||||||||:......|:.|...::....:::|.:.::|.||...:.|
Mouse   200 KGDSGGPLLCAGIAQGIASYVHRNAKPPAVFTRISHYRPWINKILRE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 56/215 (26%)
Tryp_SPc 27..225 CDD:238113 56/214 (26%)
Cma1NP_034910.2 Tryp_SPc 22..243 CDD:238113 60/224 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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