DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Gzmd

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_034502.2 Gene:Gzmd / 14941 MGIID:109255 Length:252 Species:Mus musculus


Alignment Length:249 Identity:79/249 - (31%)
Similarity:110/249 - (44%) Gaps:39/249 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQ---VSIQRDGKHL-CGGSIYSADIIITAAH 67
            :||..|..|.||     .|.||||..:.....|:.   :|:...|..: |||.:...|.::||||
Mouse     6 ILLTLLLPLRAG-----AEEIIGGHVVKPHSRPYMAFVMSVDIKGNRIYCGGFLIQDDFVLTAAH 65

  Fly    68 C----VQGQGYQVRAGS---ALKNSNGSVVDVAAIRTHEGLG-----NDIAIVRLSKPLEFTNQV 120
            |    || ....|..|:   ..|.....::.||....|....     :||.:::|....:.|..|
Mouse    66 CKNSSVQ-SSMTVTLGAHNITAKEETQQIIPVAKDIPHPDYNATIFYSDIMLLKLESKAKRTKAV 129

  Fly   121 QPIPLAKTNP--PPGSIAFVSGWGSSSYYSHPID--LQGVNLYIQ--------WPYYCGLTEPSR 173
            :|:.|.::|.  .||.:..|:||||.|.......  |:.|.|.||        :.||   ||.:.
Mouse   130 RPLKLPRSNARVKPGDVCSVAGWGSRSINDTKASARLREVQLVIQEDEECKKRFRYY---TETTE 191

  Fly   174 ICAGSFG--RAACKGDSGGPLVFDQQLVGVVSGGTKDCTYSSIYTSVPYFREWI 225
            ||||...  :...|||||||||.|.|..|:.:........|.|:|.|.:|..||
Mouse   192 ICAGDLKKIKTPFKGDSGGPLVCDNQAYGLFAYAKNGTISSGIFTKVVHFLPWI 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 70/228 (31%)
Tryp_SPc 27..225 CDD:238113 70/227 (31%)
GzmdNP_034502.2 Tryp_SPc 20..245 CDD:214473 70/228 (31%)
Tryp_SPc 21..248 CDD:238113 72/229 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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