DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and LOC100361261

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_038949773.1 Gene:LOC100361261 / 100361261 -ID:- Length:248 Species:Rattus norvegicus


Alignment Length:252 Identity:76/252 - (30%)
Similarity:113/252 - (44%) Gaps:29/252 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLALNSLSAGPVIRPEERIIGGQPIGIEEAPW----QVSIQRDGKHLCGGSIYSADIIITAAHC 68
            |||.|.|.|..|.....| ||||........|:    |:..:..|...|||.:.....::|||||
  Rat     3 LLLLLQSFSLAPKTDAGE-IIGGHEAKPHSRPYMAYLQIMDENSGNKTCGGFLIREYFVLTAAHC 66

  Fly    69 VQGQGYQVRAGS---ALKNSNGSVVDVAAIRTH-----EGLGNDIAIVRLSKPLEFTNQVQPIPL 125
            : |....|..|:   ..:.....|:.:..|..|     :.:.||:.:::|....:.|:.|:.:.|
  Rat    67 L-GSXIIVTLGAHNIKEQEKKQQVIPMVKIIPHPAYNAKTISNDLMLLKLKIKAKKTSAVKTLNL 130

  Fly   126 AKTN--PPPGSIAFVSGWGS-SSYYSHPIDLQGVNLYIQWPYYCG--LT----EPSRICAG--SF 179
            .::|  ..||.:.:|:|||. ......|..||.|.|.:|....|.  ||    :.:..|||  ..
  Rat   131 PRSNVKVKPGDVCYVAGWGKLGPMGKFPDTLQEVELIVQEDQKCESYLTNVYDKANEKCAGEPKI 195

  Fly   180 GRAACKGDSGGPLVFDQQLVGVVSGGTKDCTYSSIYTSVPYFREWILNAIDEIMSAN 236
            ..|:.:||||||||..:...|:||.|.||.:....:|.|..|    |:.|.:.|..|
  Rat   196 KHASFQGDSGGPLVCKKVAAGIVSYGCKDGSTPRAFTKVSTF----LSRIKKTMKKN 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 64/221 (29%)
Tryp_SPc 27..225 CDD:238113 64/220 (29%)
LOC100361261XP_038949773.1 Tryp_SPc 21..244 CDD:238113 66/227 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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