DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and Mcpt1l1

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001264597.1 Gene:Mcpt1l1 / 100360872 RGDID:2321286 Length:260 Species:Rattus norvegicus


Alignment Length:259 Identity:71/259 - (27%)
Similarity:111/259 - (42%) Gaps:48/259 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IQSFLLLLALNSLSAGPVIRPEERIIGGQPIGIEEAP--------WQVSIQRDGKHLCGGSIYSA 59
            :|:.|.|:|| .|.:|   ...|.|||    |:|..|        .:::.:|..|..|||.:.:.
  Rat     1 MQALLFLMAL-LLPSG---AGAEEIIG----GVESRPHSRPYMAHLEITTERGYKATCGGFLVTR 57

  Fly    60 DIIITAAHCVQGQGYQVRAG---SALKNSNGSVVDVAAIRTHEGLG-----NDIAIVRLSKPLEF 116
            ..::||||| :|:...|..|   .:...|....:.|.....|....     :||.:::|.|..:.
  Rat    58 QFVMTAAHC-KGRETTVTLGVHDVSKTESTQQKIKVEKQIVHPNYNFYSNLHDIMLLKLQKKAKV 121

  Fly   117 TNQVQPIPLAKTNP--PPGSIAFVSGWGSSSYYSHP------------IDLQGVNLYIQWPYYCG 167
            |..|..|||.:.:.  .||.:...:|||.:. .:.|            :|.:....|..:.|   
  Rat   122 TPAVDVIPLPQPSDFLKPGKMCRAAGWGQTG-VTKPTSNTLREVKQRIMDKEACKNYFHYNY--- 182

  Fly   168 LTEPSRICAGSFG--RAACKGDSGGPLVFDQQLVGVVSGGTKDCTYSSIYTSVPYFREWILNAI 229
               ..::|.||..  |:|.|||||||||......|:||.|..|....:::|.:..:..||...|
  Rat   183 ---NFQVCVGSPRKIRSAYKGDSGGPLVCAGVAHGIVSYGRGDAKPPAVFTRISPYVPWINKVI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 60/230 (26%)
Tryp_SPc 27..225 CDD:238113 60/229 (26%)
Mcpt1l1NP_001264597.1 Tryp_SPc 20..239 CDD:214473 60/230 (26%)
Tryp_SPc 21..242 CDD:238113 62/232 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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