DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and si:dkey-78l4.10

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_017208791.2 Gene:si:dkey-78l4.10 / 100034472 ZFINID:ZDB-GENE-060503-175 Length:262 Species:Danio rerio


Alignment Length:262 Identity:71/262 - (27%)
Similarity:121/262 - (46%) Gaps:48/262 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFIQSFLLLLALNSLS-----------AGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGG 54
            |.:.:|.|||.::.|.           .|.|.:|..|            |:.||:|.||:|:|||
Zfish     1 MTLITFFLLLLVSLLPHLTFMAHVGIVNGSVAKPHSR------------PYMVSVQLDGQHICGG 53

  Fly    55 SIYSADIIITAAHCVQG-QGYQVRAGS-ALKNSNGS-VVDVAAIRTHEG-----LGNDIAIVRLS 111
            .:.:.:.::|||||..| :...|..|: .|:.|..| .::|.:...|..     :.|||.:.:|.
Zfish    54 FLITEEFVLTAAHCWNGEENLTVVVGAHDLRQSMASDRIEVESYIRHPSYNSKFIWNDIMVFKLK 118

  Fly   112 KPLEFTNQVQPIPLAKTNP--PPGSIAFVSGWGSSSYYSHPIDLQGVNLYI--------QWPYYC 166
            :.:...:.|..|.::|.|.  ...::..|:|||..:..:....|...|:||        :|..:.
Zfish   119 ERVTQNSSVGWISISKKNEHVDANTLCSVAGWGLLTNGTLSDCLMEANVYIISNTECKSKWGRHF 183

  Fly   167 GLTEPSRICAGSFGRAACKGDSGGPLVFDQQLVGVVSGGTKD-CT---YSSIYTSVPYFREWILN 227
            .:::  .:|....| .:|:.|||||||.....||:.|.|... |.   :.::||::..:|.||.:
Zfish   184 SVSQ--MMCTRGHG-GSCRYDSGGPLVCGDTAVGITSFGDPHLCNSPKHPNVYTNISAYRPWIDS 245

  Fly   228 AI 229
            .|
Zfish   246 VI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 59/220 (27%)
Tryp_SPc 27..225 CDD:238113 58/219 (26%)
si:dkey-78l4.10XP_017208791.2 Tryp_SPc 26..243 CDD:214473 62/231 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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