DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send2 and gzm3.4

DIOPT Version :9

Sequence 1:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001108167.1 Gene:gzm3.4 / 100001210 ZFINID:ZDB-GENE-070912-136 Length:251 Species:Danio rerio


Alignment Length:260 Identity:67/260 - (25%)
Similarity:108/260 - (41%) Gaps:62/260 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLLALNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQRDGKHLCGGSIYSADIIITAAHC--- 68
            ::|::.:.:..|.:   |..|:||:.:.:...|:..|:|...||.|||.:...|.::|:|||   
Zfish     8 IILISYSVIKTGGM---ESGIVGGREVKLHSRPYMASLQVQRKHNCGGILIKEDYVLTSAHCWKD 69

  Fly    69 ----------------------VQGQGYQVRAGSALKNSNGSVVDVAAIRTHEGLGNDIAIVRLS 111
                                  :|.|.|........||.:..:: :..::|...|.:.:.|..|.
Zfish    70 TTNLEVVLGAHNISQRENSQQIIQVQKYIKHPNYQKKNHSFDIM-LLKLKTKAVLNHFVNITNLP 133

  Fly   112 KPLEFTNQVQPIPLAKTNPPPGSIAFVSGWGSSSYYSHPID-----LQGVNLYIQWPYYCG---- 167
            |.       :|..||   |...|||   |||    ...|.:     |:.|||.::...||.    
Zfish   134 KH-------EPSILA---PVECSIA---GWG----MQRPGEGASNVLREVNLQLESNSYCKSKWQ 181

  Fly   168 --LTEPSRICAGSFGRAA-CKGDSGGPLVFDQQLVGVVS-GGTKDCT---YSSIYTSVPYFREWI 225
              ....:.:|..|.|:.| |:||||.||..:.:|.|:.: ....:||   |..:|..|..|..||
Zfish   182 VYFNSKNMVCTASDGKKAFCQGDSGSPLFCNSELYGMAAYTYPNNCTFKEYPEVYMKVSAFLPWI 246

  Fly   226  225
            Zfish   247  246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 62/239 (26%)
Tryp_SPc 27..225 CDD:238113 62/238 (26%)
gzm3.4NP_001108167.1 Tryp_SPc 25..249 CDD:238113 64/240 (27%)
Tryp_SPc 25..246 CDD:214473 62/238 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1076876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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