DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15286 and Stmn1

DIOPT Version :9

Sequence 1:NP_001285929.1 Gene:CG15286 / 34834 FlyBaseID:FBgn0028531 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_058862.1 Gene:Stmn1 / 29332 RGDID:2992 Length:149 Species:Rattus norvegicus


Alignment Length:81 Identity:19/81 - (23%)
Similarity:28/81 - (34%) Gaps:18/81 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 EQQQAARLFLENEQLASIA-------VAATSRNELMRRPEGSMALYLEPLNRDGSYRRVVERNNE 176
            |::...:...||...:.:|       :.|...|.     |..||..||.|.....:...|.:|.|
  Rat    79 EKEVLQKAIEENNNFSKMAEEKLTHKMEANKENR-----EAQMAAKLERLREKDKHVEEVRKNKE 138

  Fly   177 DRSRRLSPDGRDRLQA 192
                  |.|..|..:|
  Rat   139 ------SKDPADETEA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15286NP_001285929.1 ZZ_PCMF_like 9..57 CDD:239078
zf-Di19 78..>107 CDD:283297
Stmn1NP_058862.1 Stathmin 5..140 CDD:395674 15/71 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..149 15/56 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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