DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF530 and Kr-h1

DIOPT Version :9

Sequence 1:NP_065931.3 Gene:ZNF530 / 348327 HGNCID:29297 Length:599 Species:Homo sapiens
Sequence 2:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster


Alignment Length:490 Identity:143/490 - (29%)
Similarity:198/490 - (40%) Gaps:110/490 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    60 VDEGTPSAESVSVEELSQGRTPKADTSTDK---------------SHPCEIC---TPVLRDILQM 106
            :|.....|::|:|:     ::|..|::|.|               |...:.|   .|.|......
  Fly    30 LDISKSPAKAVAVK-----KSPAKDSATTKMVYYSANQLLIKTEQSSQAQFCLQVPPPLTATTTS 89

Human   107 IELHASPCGQKLYLGGASRDFWM----SSNLHQLQKLDNGEKLFKVDGDQASFMMNCRFHVSGKP 167
            :.|...|.      ||....|.:    .....|||..|..::      :|..|:           
  Fly    90 VGLGVPPS------GGQQEHFELLQTPQQRQMQLQLQDQHQQ------EQQQFV----------- 131

Human   168 FTFGEVGRDFSATSGLLQHQ-------------VTPTIERPHSRIRHLRVPTGRKPLKYTESRKS 219
                      |....:.|||             ..||......||:             ||....
  Fly   132 ----------SYQLAIQQHQKQQQQQQHESITNAAPTAAPSAQRIK-------------TEPVGG 173

Human   220 FREKSVFIQHQRADSGERP-YKCSECGKSFSQSSGFLRHRKAHGR-------------------T 264
            |...:..:...|..|..:| :||.:||.:|...|....|.|:|.:                   |
  Fly   174 FPASAAVVSQVRKPSASKPQFKCDQCGMTFGSKSAHTSHTKSHSKNQDLSLNGASGAGVAAPVST 238

Human   265 RTHECSECG--KSFSRKTHLTQHQRVHTGERPYDCSECGKSFRQVSVLIQHQRVHTGERPYECSE 327
            ...|.::.|  ....:...:.....|..|..||.|:.|.|:|...:.||:|.|.||||||:||..
  Fly   239 AAIELNDAGLPVGIPKSPTIKPLANVAAGADPYQCNVCQKTFAVPARLIRHYRTHTGERPFECEF 303

Human   328 CGKSFSHSTNLYRHRSAHTSTRPYECSECGKSFSHSTNLFRHWRVHTGVRPYECSECGKAFSCNI 392
            |.|.||...||..||..||..|||:|..||::|.||..|.||.|:|||.||::||.|.|.|..:.
  Fly   304 CHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERPHKCSVCEKTFIQSG 368

Human   393 YLIHHQRFHTGERPYVCSE--CGKSFGQKSVLIQHQRVHTGERPYECSECGKVFSQSSGLFRHRR 455
            .|:.|.|.||||:||.|.|  |||.|.....|..|.|.||||:||.|..|.:.|..:..|..||.
  Fly   369 QLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICFRDFGYNHVLKLHRV 433

Human   456 AHTKTKPYECSECEKSFSCKTDLIRHQTVHTGERP 490
            .|..:|.|:|:.|:::|..|.::..|...|..|.|
  Fly   434 QHYGSKCYKCTICDETFKNKKEMEAHIKGHANEVP 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF530NP_065931.3 KRAB 14..>55 CDD:214630
KRAB 14..53 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..88 4/19 (21%)
C2H2 Zn finger 213..233 CDD:275368 4/19 (21%)
C2H2 Zn finger 241..261 CDD:275368 7/19 (37%)
COG5048 264..598 CDD:227381 97/231 (42%)
zf-C2H2 267..289 CDD:278523 2/23 (9%)
C2H2 Zn finger 269..289 CDD:275368 1/21 (5%)
zf-H2C2_2 281..306 CDD:290200 8/24 (33%)
C2H2 Zn finger 297..317 CDD:275368 8/19 (42%)
zf-H2C2_2 310..334 CDD:290200 15/23 (65%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
zf-C2H2 351..373 CDD:278523 11/21 (52%)
C2H2 Zn finger 353..373 CDD:275368 10/19 (53%)
C2H2 Zn finger 381..401 CDD:275368 8/19 (42%)
zf-H2C2_2 397..416 CDD:290200 13/20 (65%)
C2H2 Zn finger 409..429 CDD:275368 9/21 (43%)
zf-H2C2_2 422..446 CDD:290200 12/23 (52%)
C2H2 Zn finger 437..457 CDD:275368 6/19 (32%)
C2H2 Zn finger 465..485 CDD:275368 5/19 (26%)
zf-H2C2_2 477..502 CDD:290200 4/14 (29%)
C2H2 Zn finger 493..513 CDD:275368
zf-H2C2_2 505..530 CDD:290200
C2H2 Zn finger 521..541 CDD:275368
zf-H2C2_2 533..558 CDD:290200
C2H2 Zn finger 549..569 CDD:275368
zf-H2C2_2 561..586 CDD:290200
C2H2 Zn finger 577..597 CDD:275368
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368 7/19 (37%)
COG5048 <270..420 CDD:227381 77/149 (52%)
zf-C2H2 271..293 CDD:278523 9/21 (43%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
zf-H2C2_2 286..309 CDD:290200 14/22 (64%)
C2H2 Zn finger 301..321 CDD:275368 9/19 (47%)
zf-H2C2_2 313..338 CDD:290200 13/24 (54%)
C2H2 Zn finger 329..349 CDD:275368 10/19 (53%)
zf-H2C2_2 344..366 CDD:290200 13/21 (62%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 370..396 CDD:290200 15/25 (60%)
C2H2 Zn finger 385..407 CDD:275368 9/21 (43%)
zf-H2C2_2 400..424 CDD:290200 12/23 (52%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
zf-C2H2 441..463 CDD:278523 6/21 (29%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.