DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dyrk2 and clk1

DIOPT Version :9

Sequence 1:NP_001260456.1 Gene:Dyrk2 / 34831 FlyBaseID:FBgn0016930 Length:757 Species:Drosophila melanogaster
Sequence 2:XP_012814515.2 Gene:clk1 / 549675 XenbaseID:XB-GENE-6041600 Length:480 Species:Xenopus tropicalis


Alignment Length:440 Identity:128/440 - (29%)
Similarity:201/440 - (45%) Gaps:81/440 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NSSNGGNERGSSTKSNSSSGSGSSGNSASSTGSGELKCNTPMTPSELVKKFRNYLTDLEFEELKV 185
            |...|.:|.....:|:.|||..||.:|:.                                    
 Frog    85 NYKGGHHEHRHHYRSSKSSGQSSSSSSSH------------------------------------ 113

  Fly   186 YKEVWYFGQHASKNYNKPAPTANTTNLGYD----------DDNGNYKIIEHDHIAFRYEILEVIG 240
                       .|.:.||..::.|::|...          |:.|:......|.:..||||:..:|
 Frog   114 -----------KKRHKKPHHSSRTSHLKSHRKKRSRSVEVDEEGHLICESGDVLRERYEIVHALG 167

  Fly   241 KGSFGQVIRALDH-KTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYF 304
            :|:||:|:..:|| :....||:|||:|.:|:...|..|:.:|:.|..||...:...:.||::...
 Frog   168 EGAFGKVLECIDHLRGGERVAVKIIKNVERYREAAQSEIQVLEHLNRKDPINTFRCVQMLEWFDH 232

  Fly   305 RKHLCITFELMSLNLYELIKKNNYNGFSMSLIRRFCNSIVKCLRLLYKENIIHCDLKPENILL-- 367
            ..|:||.|||:.|:.|:.||:|::..|.:..||.....|.|.:..|::..:.|.||||||||.  
 Frog   233 HGHICIVFELLGLSTYDFIKENSFLPFPLDHIRNMAYQICKSINFLHQNQLTHTDLKPENILFVH 297

  Fly   368 ---------------KQRGSSSIKVIDFGSSCYVDRKIYTYIQSRFYRSPEVILGLQYGTAIDMW 417
                           :...:|.||::||||:.|.|......:.:|.||:|||||.|.:....|:|
 Frog   298 SDYVVHFNHAKKQDERYLKNSDIKIVDFGSATYNDEYHSALVSTRHYRAPEVILELGWSQPCDVW 362

  Fly   418 SLGCILAELYTGFPLFPGENEVEQLACIMEVLGLPPKVLISVARRRRLFF-DSRDAPRCITNTKG 481
            |:||||.|.|.|..:|...:..|.||.:..:||..|..:|...|:.:.|: |..|...  .::.|
 Frog   363 SIGCILIEYYLGLTVFQTHDSKEHLAMMERILGPLPLHMIKKTRKHKYFYLDRLDWDE--HSSAG 425

  Fly   482 RKRSPGSKSLAHILHCQDR---YFIDFLQRCLEWDPAERMTPDEAAHHEF 528
            |......|.|...:...::   ...|.:||.||:|||:|:|.:||..|.|
 Frog   426 RYVKKRCKPLKEYIVSDNKDHHQLFDLIQRMLEYDPAKRITLEEALKHPF 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dyrk2NP_001260456.1 PKc_DYRK4 186..529 CDD:271127 118/375 (31%)
S_TKc 233..529 CDD:214567 109/318 (34%)
clk1XP_012814515.2 PKc_like 147..476 CDD:419665 111/331 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.