DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dyrk2 and prpf-4

DIOPT Version :9

Sequence 1:NP_001260456.1 Gene:Dyrk2 / 34831 FlyBaseID:FBgn0016930 Length:757 Species:Drosophila melanogaster
Sequence 2:NP_001250391.1 Gene:prpf-4 / 172443 WormBaseID:WBGene00004186 Length:775 Species:Caenorhabditis elegans


Alignment Length:585 Identity:144/585 - (24%)
Similarity:244/585 - (41%) Gaps:128/585 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DLVWCPGIQLDNEKLRRDVRLSGSRLDLPQLCNGSRRLDGHNNHVAANENTVTTTSLNGNGNGNG 101
            |:.|    .||::......::..:|....|:.   ::::||     ..|||..            
 Worm   220 DVEW----NLDSDSDDEQKKIEAARKRRIQII---KKIEGH-----TEENTPR------------ 260

  Fly   102 NSNSNNNNNIGSPVSSSTTNSSNGGNERGSSTKSNSSSGSGSSGNSASSTGSGELKCNTPM---- 162
            :|::..::.||...:..:.:||:...:.....|...:.....|....|..|||   .:||:    
 Worm   261 DSSTPRSDTIGDKKTDESEDSSSDSEDDEDDRKLAEAKDLIKSTRFGSEQGSG---ASTPVSIQS 322

  Fly   163 ---TPSELVKKFRNYLTDL-EFEELKV-----------YKEVWY--------------------- 191
               ||::.....|:.:..: :.:|..|           |:|.|:                     
 Worm   323 DNDTPTDFFSGLRDKMVHMKDADEHNVDEVLQRGKDEEYREDWHTQLKEQEKREEEEKKKKLEAE 387

  Fly   192 -FGQHASKNY-------------NKPAPTANTTNLG------------YDDDNGNYKIIEHDHIA 230
             ..:.|.|..             |:..|..:||..|            :||..|.|::...:.:.
 Worm   388 AAAEAAKKKKQEEDDTGFDMFADNEELPQDSTTIDGHSGAVHDTLKDNWDDVEGYYRVRIGELLD 452

  Fly   231 FRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNV 295
            .||.::...|.|.||.|.|..|......||:|||||.:......:.||.:|.:|.|.|.:..::.
 Worm   453 TRYRVVGFTGAGVFGNVCRCNDQTKGNTVAVKIIRNNEVMYKTGLRELEVLRKLNEADKEDKYHC 517

  Fly   296 IHMLDYTYFRKHLCITFELMSLNLYELIKK-NNYNGFSMSLIRRFCNSIVKCLRLLYKENIIHCD 359
            :.:........|||:.||.:|:||.||:|| ...:|..:..:|.:...::..||||.|...:|.|
 Worm   518 LRLFRTFKHHNHLCLVFENLSMNLRELLKKYGQKDGLHLKAVRSYAQQLLLALRLLKKLEFVHAD 582

  Fly   360 LKPENILLKQRGSSSIKVIDFGSSCYV-DRKIYTYIQSRFYRSPEVILGLQYGTAIDMWSLGCIL 423
            :||:|||:.: ...::|:.||||:..| ::::..|:.|||||:||::||:::..|||:||:...|
 Worm   583 IKPDNILVNE-SKLTLKLCDFGSAGRVNEQELAPYLVSRFYRAPEIMLGVRHDYAIDLWSVAVTL 646

  Fly   424 AELYTGFPLFPGENEVEQLACIMEVLGLPPKVLISVARRRRLFFD--------------SRDAPR 474
            .|:|||..:|||......|....:|.|..|..|:..::.:...||              .|:...
 Worm   647 YEVYTGKIMFPGRTNNHMLKLFTDVKGKYPNKLVRKSQFKDTHFDVNCNLLYQEVDKVTERNKIT 711

  Fly   475 CITNTK-----------GRKRSPGSKSLAHILHCQDRYFIDFLQRCLEWDPAERMTPDEAAHHEF 528
            .:.|.|           |::.|.....       |.:.|...|...|..||::|.|.:||..|.|
 Worm   712 VLANLKPTRDLESELIAGQRLSRDQMD-------QIQAFRTLLDGMLILDPSKRTTCNEALKHPF 769

  Fly   529  528
             Worm   770  769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dyrk2NP_001260456.1 PKc_DYRK4 186..529 CDD:271127 115/417 (28%)
S_TKc 233..529 CDD:214567 100/323 (31%)
prpf-4NP_001250391.1 STKc_PRP4 454..770 CDD:271037 101/324 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D870358at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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