DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43333 and mfas

DIOPT Version :9

Sequence 1:NP_788051.1 Gene:CG43333 / 34830 FlyBaseID:FBgn0263038 Length:1166 Species:Drosophila melanogaster
Sequence 2:NP_788655.1 Gene:mfas / 41455 FlyBaseID:FBgn0260745 Length:905 Species:Drosophila melanogaster


Alignment Length:1056 Identity:206/1056 - (19%)
Similarity:363/1056 - (34%) Gaps:321/1056 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 QTIP-------QQQSQFNYQPQSSQQ--QQYQLTPQLGLPVP---QIFSNVQATPFP--EPTRGS 283
            |.:|       ::.::|:....|:.:  ......|.|..|:|   .:|:.:...|..  ||    
  Fly    17 QAVPFYGDSSSEEVAEFDDSSDSTHESSDNSSFMPHLTHPLPAHRNLFAPLPFAPLAPLEP---- 77

  Fly   284 FQQQQQPV--QQPQFQHQFVNAPSPIQPQAQPADQEYKQKLIQKHEQFVAKQYEKSQHKVRQQHE 346
                |.|:  |..|......|.|:|:.||.      :...|:.........::...:|:      
  Fly    78 ----QDPLHAQASQRMASVWNGPAPLAPQL------HSSHLLPLFSSGYDTEFVPLEHQ------ 126

  Fly   347 EFLLKQHQIKQHILPTIVTQHNANYQNSPY--------VAAPARGRPVAHPTEYNQ--------- 394
                :|.|.:|....|:..|..:..:..|:        |.:|       :|..:.|         
  Fly   127 ----QQPQGRQETAATVPAQTPSGVEQKPFNVDTITTDVNSP-------NPAIFFQQSFPFFGNE 180

  Fly   395 -FNS-------ALQQYYKEHPTTTT---TTTTTTTTTEATTT----------------------- 425
             |||       |.|:.:.:.|...|   ...|..:.|||..|                       
  Fly   181 FFNSFGGFGFGAAQEPWWKGPNVCTEKEEDETVASETEAEETVDTFGQERDGVTNVVRSPLFGQF 245

  Fly   426 ----------PKKNIYAQVKSELGK-----------------------FPSQK-SKKPVKTIARD 456
                      |.|::..::.::.||                       .|.:| ..|.|:..|.|
  Fly   246 QFSVNSCAEKPNKHVCTKIVNQNGKKKTLTLTRQCCYGYGRPRNADFTTPCEKIDIKDVEATASD 310

  Fly   457 DLLKQ-LKAALSEAPQQPLTGNKTYDEMDLVLPNGQRVQVIR--TTDPNLVQGQKAYSQEQLQTL 518
            ...|| |::|.:......:.|..:..::.|.:||.......|  ....|.|:..||.:.:  .::
  Fly   311 MGAKQFLESARTAGELADMLGAGSGKKVTLFVPNDAAFMEYRGHHQQENNVEDAKAEASK--PSI 373

  Fly   519 LAQQALGGETKLSLSDVAPSKSKDLELPGGGKVQILRSPDPQESDTLPSGSLPGGVDLSSLAALY 583
            ....|:.||  :.|.||...|....|||.    |.:|         :.|..||..:.|...    
  Fly   374 YKLHAVLGE--VQLEDVPNEKLLQTELPD----QKIR---------INSYQLPAALGLEPY---- 419

  Fly   584 GGGAGDIQGISNGANSIASSAVITSDSDEPPSLEELAKRGLIPDGYEIEGLSPKSQAPATAAPPT 648
                           ..|::.|.....|      :|:::.|:   :.:.|:              
  Fly   420 ---------------RFAANCVPIEKHD------KLSEQALV---HTLGGV-------------- 446

  Fly   649 LPPKKKATYVYLEEQTDGSFKIQGVKANGEKETKQTGSEVESILERIRSGEIKLPPSVSRLTLPN 713
            |.|..|.....:.|:.|.|.                   :.::||:.....:          |.:
  Fly   447 LKPLTKNLMDIIRERADMSI-------------------MRTVLEKTNLSAM----------LED 482

  Fly   714 DELVEIKSGKIIQTTRAPTTTTSTTTTTTTTPTPFI------SRGTPSNHRQYHPSRTSTTTTTT 772
            |:               |.|....|........|.:      .||..||..:.| ....|..:..
  Fly   483 DK---------------PVTIFVPTDAAFDKLEPHLRRALKEGRGCASNILKNH-LLDLTFCSLA 531

  Fly   773 TTTTAPTTARHNLIFESSTSHVNAASLIRTTTSPIYGGSTVTVSPYLEGVSTHLPVVTERLSDVA 837
            |...|.||| :||:.|....:....:..:|..:|||                           :.
  Fly   532 TVPGAKTTA-YNLLGEPLLLNRTHRAANQTGPTPIY---------------------------IN 568

  Fly   838 NNAELLPPIPQYADALVQETENTEKAAQANPPTSSVLSNPSEDLLQILKTNGLFAMAKYLRQSGL 902
            |.|:::       ||.:..|...........||.|.|     .:..::....|....:.|..||.
  Fly   569 NLAKII-------DADIMGTNGVLHVIDTILPTESAL-----PMTSLMSQKNLTIFQRLLEASGY 621

  Fly   903 DSILNETGPYTIFVPTDKAFKNLLVQLGGPERAEEKFQSNPRLLS------GLLLHHVIPGAFEI 961
            |...::....|||.|||||.:|       .|.| ...:..|.||:      ..|.:||:....:.
  Fly   622 DDQFDDLDNVTIFAPTDKALQN-------TEWA-RMLKEQPELLNHNLDLLEFLNYHVVKPMIKT 678

  Fly   962 ATLQDEMTGVSLAGTQLRVNQYNMHDQEWNDVTLTTINGAMVVLNKKDIKIPQGVAHAVDRVMFP 1026
            ..| .|.:..::||:.:|:|.|:.|....:.:...|:|.|.:|  ..|.:....|.|.|||.:.|
  Fly   679 CDL-SEKSLPTVAGSSVRLNLYSTHALFSDVMNRATVNCARLV--HFDDESCGSVLHQVDRALAP 740

  Fly  1027 LPVGDILQTLQSDREGRFSNFLKILYTSGLSEKLQSKGVKTYTVFAPVDKSFSELDSDTLEKLYN 1091
             |..::|:.|:::  ..:|.||:::..:.|:: |.|...::.|:..|.:..|.||:...     .
  Fly   741 -PKNNMLKLLEAN--PNYSKFLELVRKANLTQ-LLSNDSRSLTLLVPKNDIFEELNESG-----E 796

  Fly  1092 DKDTAEQFAM--KHIVPGALFSAGM-----RFYQVKDSLSTGKTVILQKTSAGKIKVNDAQMVTS 1149
            ....|:..|:  .|||...:..||:     .|.:..:|:| |:.  |:.|...:.|:.:|.:...
  Fly   797 GSKPADPMALVKTHIVEDVVCCAGIIPTNWPFVRSIESIS-GQH--LRITRDRRPKIENAGVTKC 858

  Fly  1150 NIPATNGVIHALDGVL 1165
            ::.||||::|.::.::
  Fly   859 DVVATNGILHEINDII 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43333NP_788051.1 FAS1 844..1026 CDD:225214 47/187 (25%)
Fasciclin 889..1026 CDD:280607 40/142 (28%)
Fasciclin 1042..1165 CDD:280607 31/129 (24%)
mfasNP_788655.1 FAS1 339..450 CDD:214719 31/169 (18%)
Fasciclin 462..592 CDD:280607 33/209 (16%)
Fasciclin 607..740 CDD:280607 40/143 (28%)
Fasciclin 753..875 CDD:280607 31/131 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456381
Domainoid 1 1.000 54 0.196 Domainoid score I11151
eggNOG 1 0.900 - - E1_COG2335
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D926852at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100594
Panther 1 1.100 - - P PTHR10900
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.750

Return to query results.
Submit another query.